RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 MYF5P13349 255 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 NCK1P16333 377 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ITGA2P17301 1181 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 MATN1P21941 496 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 LCN1P31025 176 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 MAP3K8P41279 467 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SELENOWP63302 87 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 OLR1P78380 273 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 DCDP81605 110 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 DUSP2Q05923 314 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 MGAT2Q10469 447 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 FUT7Q11130 342 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SLC13A2Q13183 592 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ELAVL1Q15717 326 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ZSWIM7Q19AV6 140 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 HEPHL1Q6MZM0 1159 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PCSK4Q6UW60 755 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 TMEM107Q6UX40 140 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 NLGN4XQ8N0W4 816 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ESX1Q8N693 406 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 CHDHQ8NE62 594 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PLPP5Q8NEB5 264 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 NLGN4YQ8NFZ3 816 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 OR7G2Q8NG99 324 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PNPT1Q8TCS8 783 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SLC38A5Q8WUX1 472 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 APOBEC4Q8WW27 367 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 GEMIN6Q8WXD5 167 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 NR4A3Q92570 626 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 GIMAP5Q96F15 307 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SLC47A1Q96FL8 570 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PEX11GQ96HA9 241 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 DGAT2Q96PD7 388 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 OR6C1Q96RD1 312 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 DOHHQ9BU89 302 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 OR51I1Q9H343 314 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PIGUQ9H490 435 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PIF1Q9H611 641 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 WDR54Q9H977 334 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ADAP2Q9NPF8 381 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 IL1RAPQ9NPH3 570 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SLC39A1Q9NY26 324 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 GMPR2Q9P2T1 348 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 DNAJB9Q9UBS3 223 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 BAG5Q9UL15 447 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 USP22Q9UPT9 525 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 CFL2Q9Y281 166 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 CLDN16Q9Y5I7 305 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SPTA1P02549 2419 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ZNF462Q96JM2 2506 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 TCRBV16S1A1N1A0A5B0 115 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 OR6C76A6NM76 312 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 A8MU76 341 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 MKRN2OSH3BPM6 223 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 SYT5O00445 386 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 POLR1CO15160 346 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 CASC3O15234 703 aaKnown RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 LDB3O75112 727 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 PRKD3O94806 890 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 PGM3O95394 542 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 BAG2O95816 211 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 C8orf89P0DMQ9 161 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 NR2F1P10589 423 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 NT5EP21589 574 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 CASRP41180 1078 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 PDX1P52945 283 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 RHAGQ02094 409 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 KCNAB2Q13303 367 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 LASP1Q14847 261 aaKnown RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 ZNHIT3Q15649 155 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 TBR1Q16650 682 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 NKAIN1Q4KMZ8 207 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 LRRC23Q53EV4 343 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 CYBRD1Q53TN4 286 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 ZNF385CQ66K41 422 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 TNFAIP8L2Q6P589 184 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 RNF111Q6ZNA4 994 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 SVOPLQ8N434 492 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 NFKBIDQ8NI38 313 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 ADAMTS15Q8TE58 950 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 DAZLQ92904 295 aaKnown RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 EXTL1Q92935 676 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 RIT1Q92963 219 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 UCN3Q969E3 161 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 PPWD1Q96BP3 646 aaKnown RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 TMEM19Q96HH6 336 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 FBXL20Q96IG2 436 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 BTBD9Q96Q07 612 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 ZNF347Q96SE7 839 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 LMF2Q9BU23 707 aaKnown RBP8.48□□□□□ -1.05
NR1I3-228ENST00000511676 C9orf16Q9BUW7 83 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 CHID1Q9BWS9 393 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 ALOXE3Q9BYJ1 711 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 KLHL4Q9C0H6 718 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 SLC7A5P2Q9GIP4 190 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 SERHL2Q9H4I8 314 aa8.48□□□□□ -1.05
NR1I3-228ENST00000511676 GPN2Q9H9Y4 310 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms