RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ZNF490Q9ULM2 529 aaPredicted RBP2.49□□□□□ -2.01
CHD1-207ENST00000511628 MGAT4AQ9UM21 535 aa2.49□□□□□ -2.01
CHD1-207ENST00000511628 MGAT4BQ9UQ53 548 aa2.49□□□□□ -2.01
CHD1-207ENST00000511628 CPQQ9Y646 472 aa2.49□□□□□ -2.01
CHD1-207ENST00000511628 FKBP7Q9Y680 259 aa2.49□□□□□ -2.01
CHD1-207ENST00000511628 ATRXP46100 2492 aa2.49□□□□□ -2.01
CHD1-207ENST00000511628 GON4LQ3T8J9 2241 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 A0A0J9YVX5 310 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 A0A1B0GTH9 108 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 A0A1B0GUL7 405 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 BCLAF3A2AJT9 711 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 ANKRD30BLA7E2S9 258 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 WASHC1A8K0Z3 465 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 FOXI3A8MTJ6 420 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 WASH3PC4AMC7 463 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 EI24O14681 340 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 CFLARO15519 480 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 PHF1O43189 567 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 BCL2L11O43521 198 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 GALR3O60755 368 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 TOM1L1O75674 476 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 IGSF6O95976 241 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 IGHV3-9P01782 118 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 HEXBP07686 556 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 HOXD4P09016 255 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 ANXA4P09525 319 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 RRASP10301 218 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 DESP17661 470 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 SPRP35270 261 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 HMGCLP35914 325 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 MDH1P40925 334 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 PTGFRP43088 359 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 TRPC1P48995 793 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 TRA2BP62995 288 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 MRPS6P82932 125 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 SRYQ05066 204 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 ZP4Q12836 540 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 PDZK1IP1Q13113 114 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 EXOSC2Q13868 293 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 PARP6Q2NL67 630 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 TTC31Q49AM3 519 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 EIPR1Q53HC9 387 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 TAF3Q5VWG9 929 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 GALNT17Q6IS24 598 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 APOOLQ6UXV4 268 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 WASH2PQ6VEQ5 465 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 LHFPL4Q7Z7J7 247 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 RANBP3LQ86VV4 465 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 OR52J3Q8NH60 311 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 RHOXF1Q8NHV9 184 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 CCDC110Q8TBZ0 833 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 ITLN1Q8WWA0 313 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 RBM24Q9BX46 236 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 TSPY26PQ9H489 355 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 KAT8Q9H7Z6 458 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 ESM1Q9NQ30 184 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 POLE3Q9NRF9 147 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 CENPMQ9NSP4 180 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 BLOC1S6Q9UL45 172 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 SLC9A8Q9Y2E8 581 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.48□□□□□ -2.01
CHD1-207ENST00000511628 ADAMTS9Q9P2N4 1935 aa2.48□□□□□ -2.01
CHD1-207ENST00000511628 HCFC1P51610 2035 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CUX2O14529 1486 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 A0A087WZY1 265 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 LRIT2A6NDA9 550 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 FBLL1A6NHQ2 334 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 KLLNB2CW77 178 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 PDLIM1O00151 329 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 MCF2LO15068 1137 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ALOX15BO15296 676 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 PDE5AO76074 875 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 MBD3O95983 291 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 HOXB7P09629 217 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 BCL3P20749 454 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 PTMSP20962 102 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CALML3P27482 149 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CYLC1P35663 651 aaPredicted RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 ACAA2P42765 397 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 MFAP2P55001 183 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 PPIAP62937 165 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 HERVK_113P63132 956 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ERVK-8P63133 956 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 SCGB2A2Q13296 93 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 TFDP1Q14186 410 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 TRIP10Q15642 601 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CDKN3Q16667 212 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 SHROOM1Q2M3G4 852 aaPredicted RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 C14orf28Q4W4Y0 310 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 NHLRC3Q5JS37 347 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 DMKNQ6E0U4 476 aaPredicted RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 SULT1C3Q6IMI6 304 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ARMCX5Q6P1M9 558 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 LEG1Q6P5S2 330 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ARSKQ6UWY0 536 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 HACD2Q6Y1H2 254 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 FAM43BQ6ZT52 329 aaPredicted RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 P4HA3Q7Z4N8 544 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CEACAM19Q7Z692 300 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms