RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 ARPC1BO15143 372 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 SYT7O43581 403 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 LCMT2O60294 686 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 FCMRO60667 390 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 E2F6O75461 281 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ZFAND5O76080 213 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 STAMBPO95630 424 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 MBD3O95983 291 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 NDUFB10O96000 172 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 NPPAP01160 153 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 EPOP01588 193 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 TRIM49P0CI25 452 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 TRIM49CP0CI26 452 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 CT45A8P0DMV1 189 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 CT45A9P0DMV2 189 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 PNMTP11086 282 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 GP9P14770 177 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 HNF1AP20823 631 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 SRD5A2P31213 254 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 NUP62P37198 522 aaPredicted RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 ALDH3B1P43353 468 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 FNTAP49354 379 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 CLCN4P51793 760 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 DHODHQ02127 395 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 TGM3Q08188 693 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 FGL1Q08830 312 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 DNAJC3Q13217 504 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 MTHFSDQ2M296 383 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 DCAF4L1Q3SXM0 396 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 LRIT3Q3SXY7 679 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 LRRC37A5PQ49AS3 106 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 FAM106AQ4KMX7 169 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 CT45A2Q5DJT8 189 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ZC2HC1BQ5TFG8 222 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 PRAMEF5Q5TYX0 476 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ATF7IP2Q5U623 682 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 PRAMEF6Q5VXH4 476 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 LIPKQ5VXJ0 399 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 SLC39A4Q6P5W5 647 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 TRIM65Q6PJ69 517 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 Q6ZPB1 254 aaPredicted RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 CENPUQ71F23 418 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 TRPM8Q7Z2W7 1104 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 C5orf24Q7Z6I8 188 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 VPS36Q86VN1 386 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 PAQR7Q86WK9 346 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 CATSPERDQ86XM0 798 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ZNF683Q8IZ20 524 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 SLC43A2Q8N370 569 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ARFGAP2Q8N6H7 521 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ANKFN1Q8N957 763 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 RNF149Q8NC42 400 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 RAET1EQ8TD07 263 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 SEPT8Q92599 483 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 MCUR1Q96AQ8 359 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 TMEM45BQ96B21 275 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 LRRC39Q96DD0 335 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ATP6V1G3Q96LB4 118 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 NSMCE3Q96MG7 304 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 ZNF300Q96RE9 604 aaPredicted RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 NPY6RQ99463 290 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 CHP1Q99653 195 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 NPAS2Q99743 824 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 PAIP2Q9BPZ3 127 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 C11orf70Q9BRQ4 267 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 MCRIP2Q9BUT9 160 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 LRRCC1Q9C099 1032 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 MAGT1Q9H0U3 335 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 UPF3AQ9H1J1 476 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 C5orf66Q9H5L9 145 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 SGK2Q9HBY8 427 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 P2RX2Q9UBL9 471 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 DBF4Q9UBU7 674 aaPredicted RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 SEC14L3Q9UDX4 400 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 STK38LQ9Y2H1 464 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 NOSIPQ9Y314 301 aaKnown RBP3.29□□□□□ -1.88
CAST-229ENST00000510098 KIF7Q2M1P5 1343 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 RNF123Q5XPI4 1314 aa3.29□□□□□ -1.88
CAST-229ENST00000510098 PARD3Q8TEW0 1356 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 A0A1B0GTQ1 180 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 hCG_38984A0A1B0GV85 526 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 HEATR9A2RTY3 570 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 CCDC162PA2VCL2 907 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 ACOD1A6NK06 481 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 TCP11X1B4DZS4 312 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 CLDN5O00501 218 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 SDHDO14521 159 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 ARPC3O15145 178 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 CETN3O15182 167 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 NMT2O60551 498 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 DNAJB6O75190 326 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 TRIM3O75382 744 aaPredicted RBP3.28□□□□□ -1.88
CAST-229ENST00000510098 NDUFA7O95182 113 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 ANP32DO95626 131 aa3.28□□□□□ -1.88
CAST-229ENST00000510098 PABPC4LP0CB38 370 aaKnown RBP3.28□□□□□ -1.88
CAST-229ENST00000510098 TROVE2P10155 538 aaKnown RBP eCLIP3.28□□□□□ -1.88
CAST-229ENST00000510098 MX1P20591 662 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms