RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SH2D4BQ5SQS7 431 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 TMEM107Q6UX40 140 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 LARP4Q71RC2 724 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBE3D-207ENST00000509102 SLC44A2Q8IWA5 706 aaPredicted RBP17.06■□□□□ 0.32
UBE3D-207ENST00000509102 LILRB4Q8NHJ6 448 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 SLC35A4Q96G79 324 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 ADOQ96SZ5 270 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 MECRQ9BV79 373 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 PARD6BQ9BYG5 372 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 ANKRA2Q9H9E1 313 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 CCL27Q9Y4X3 112 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 DNAJC15Q9Y5T4 150 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 NINQ8N4C6 2090 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 FAM90A27PA6NNH2 459 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 PLOD2O00469 737 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 SNPHO15079 494 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 PDPK1O15530 556 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 CT45A8P0DMV1 189 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 CT45A9P0DMV2 189 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 ENDOUP21128 410 aaKnown RBP17.05■□□□□ 0.32
UBE3D-207ENST00000509102 SOX18P35713 384 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 ZFP36L2P47974 494 aaKnown RBP17.05■□□□□ 0.32
UBE3D-207ENST00000509102 CORO7P57737 925 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 KIAA0040Q15053 153 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 CDSNQ15517 529 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 GALNTL6Q49A17 601 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 CT45A2Q5DJT8 189 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 CROCCP2Q86T23 111 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 RPRMLQ8N4K4 120 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 PPCDCQ96CD2 204 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 ZNF764Q96H86 408 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-207ENST00000509102 PPP3R2Q96LZ3 170 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 AMDHD1Q96NU7 426 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 NODALQ96S42 347 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 UBQLN3Q9H347 655 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 GLIPR2Q9H4G4 154 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 Q9N2J8 555 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 C19orf53Q9UNZ5 99 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-207ENST00000509102 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
UBE3D-207ENST00000509102 AHRRA9YTQ3 701 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 ESPNB1AK53 854 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 CTIFO43310 598 aaKnown RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 CBR3O75828 277 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 CHRNGP07510 517 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 IFI6P09912 130 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 GLI4P10075 376 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 PTPN6P29350 595 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 PNLIPRP2P54317 469 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 PSMD4P55036 377 aaKnown RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 CYP27C1Q4G0S4 372 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 FNDC7Q5VTL7 733 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 Q6ZSR9 355 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 R3HCC1LQ7Z5L2 792 aaKnown RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 CCDC71Q8IV32 467 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 ULK2Q8IYT8 1036 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 AGR3Q8TD06 166 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 GFM2Q969S9 779 aaKnown RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 ZBED6CLQ96FA7 236 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 TSSK3Q96PN8 268 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 SPOCK3Q9BQ16 436 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 REEP4Q9H6H4 257 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 C3orf14Q9HBI5 128 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 GALNT9Q9HCQ5 603 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 SH3BP4Q9P0V3 963 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 MAPRE3Q9UPY8 281 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 EXO1Q9UQ84 846 aaKnown RBP17.04■□□□□ 0.32
UBE3D-207ENST00000509102 FAM215AQ9Y5M1 114 aa17.04■□□□□ 0.32
UBE3D-207ENST00000509102 TTC36A6NLP5 189 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 PIP5K1BO14986 540 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 LSM1O15116 133 aaKnown RBP17.03■□□□□ 0.32
UBE3D-207ENST00000509102 BPGMP07738 259 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 MYZAPP0CAP1 466 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 SDC1P18827 310 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 TACR1P25103 407 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 SSTR2P30874 369 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 HPCAL1P37235 193 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 RPL3P39023 403 aaKnown RBP17.03■□□□□ 0.32
UBE3D-207ENST00000509102 CLK3P49761 638 aaKnown RBP17.03■□□□□ 0.32
UBE3D-207ENST00000509102 HSPB3Q12988 150 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 DECR1Q16698 335 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 VPS26BQ4G0F5 336 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 ATP6AP1LQ52LC2 224 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 RFTN2Q52LD8 501 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-207ENST00000509102 RIPPLY2Q5TAB7 128 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 LRIG3Q6UXM1 1119 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 MEX3BQ6ZN04 569 aaKnown RBP17.03■□□□□ 0.32
UBE3D-207ENST00000509102 ZCCHC23Q6ZST2 131 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 NUDCD3Q8IVD9 361 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 OR2L13Q8N349 312 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 OR2T11Q8NH01 316 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 OR14L1PQ8NHC6 308 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 MTERF3Q96E29 417 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 ELP4Q96EB1 424 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 EGLN2Q96KS0 407 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 FCRL1Q96LA6 429 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 CENPHQ9H3R5 247 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 TUBB1Q9H4B7 451 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 CAMK2AQ9UQM7 478 aa17.03■□□□□ 0.32
UBE3D-207ENST00000509102 WIF1Q9Y5W5 379 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms