RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 C19orf25Q9UFG5 118 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P44-201ENST00000508597 MRPS2Q9Y399 296 aaKnown RBP5.14□□□□□ -1.59
HMGB1P44-201ENST00000508597 FIS1Q9Y3D6 152 aa5.14□□□□□ -1.59
HMGB1P44-201ENST00000508597 ASB4Q9Y574 426 aa5.14□□□□□ -1.59
HMGB1P44-201ENST00000508597 USH1CQ9Y6N9 552 aa5.14□□□□□ -1.59
HMGB1P44-201ENST00000508597 NUP214P35658 2090 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P44-201ENST00000508597 NUP210LQ5VU65 1888 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 GNG14A0A1W2PPG7 69 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 A0A1W2PQ72 361 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MED19A0JLT2 244 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 GMNCA6NCL1 334 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CAPN14A8MX76 684 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 TMEM233B4DJY2 109 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 SGK494L7N484 410 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CYR61O00622 381 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 SDHDO14521 159 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZNF195O14628 629 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 POLR3GO15318 223 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 KLHL41O60662 606 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CTNSO60931 367 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 PEX11AO75192 247 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RDH16O75452 317 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 EEDO75530 441 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 SKAP2O75563 359 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CREG1O75629 220 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 HEXBP07686 556 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 VIMP08670 466 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 ANXA4P09525 319 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 FAM58BPP0C7Q3 252 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 KITP10721 976 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 IDO1P14902 403 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MALP21145 153 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 FPR1P21462 350 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CPN2P22792 545 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MMP11P24347 488 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CERS1P27544 350 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 GALNSP34059 522 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 DLSTP36957 453 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 FOLR3P41439 243 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 XCR1P46094 333 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 OR1D4P47884 311 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MRPL19P49406 292 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 EMP2P54851 167 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 C21orf58P58505 322 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RPL38P63173 70 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 TNFRSF17Q02223 184 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CNN3Q15417 329 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 PDCD2Q16342 344 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RFTN2Q52LD8 501 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 C1orf189Q5VU69 101 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 OR52E8Q6IFG1 317 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 NOXRED1Q6NXP6 359 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 SCIMPQ6UWF3 145 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 FAM198BQ6UWH4 519 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZNF793Q6ZN11 406 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 FAM47EQ6ZV65 393 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 PRSS41Q7RTY9 318 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RAB43Q86YS6 212 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 TMEM132CQ8N3T6 1108 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RNF175Q8N4F7 328 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 ENDOVQ8N8Q3 282 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 FNDC5Q8NAU1 212 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 OR2T11Q8NH01 316 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 AGR3Q8TD06 166 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CT55Q8WUE5 264 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 METTL21AQ8WXB1 218 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 THAP4Q8WY91 577 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CATSPER2Q96P56 530 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZNF317Q96PQ6 595 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 CCNL2Q96S94 520 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 HBEGFQ99075 208 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 PRPF18Q99633 342 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 NUF2Q9BZD4 464 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RABEP2Q9H5N1 569 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 LDAHQ9H6V9 325 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 RPF2Q9H7B2 306 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 GPN2Q9H9Y4 310 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MYNNQ9NPC7 610 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 TCF7L2Q9NQB0 619 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 TAS2R7Q9NYW3 318 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MAU2Q9Y6X3 613 aa5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 MAP1BP46821 2468 aaKnown RBP5.13□□□□□ -1.59
HMGB1P44-201ENST00000508597 A0A087WV48 116 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 LOC102723996A0A087X1L8 192 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 A0A0G2JN53 185 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 LOC101059948A0A1B0GTJ6 334 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 B5MCH6 92 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 C4orf51C9J302 202 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 SAP18O00422 153 aaKnown RBP5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 RTCAO00442 366 aaKnown RBP5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 PEX12O00623 359 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 UBDO15205 165 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 TLX3O43711 291 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 TMPRSS11DO60235 418 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 DIAPH2O60879 1101 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 ALOX12BO75342 701 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 SH3BGRLO75368 114 aa5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 KLF7O75840 302 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P44-201ENST00000508597 GPR75O95800 540 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms