RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SLC7A2P52569 658 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 DSCR10P59022 87 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 POLR2FP61218 127 aaKnown RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 PPIAP62937 165 aaKnown RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 HERVK_113P63132 956 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ERVK-8P63133 956 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 GSTO1P78417 241 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 SRYQ05066 204 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 INAQ16352 499 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 CDKN3Q16667 212 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 TMEM52BQ4KMG9 183 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 EIPR1Q53HC9 387 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 PRR5LQ6MZQ0 368 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 SLC39A4Q6P5W5 647 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 CATSPER4Q7RTX7 472 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 NET1Q7Z628 596 aaPredicted RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 HIPK1Q86Z02 1210 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 CENPSQ8N2Z9 138 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ANKRD20A12PQ8NF67 263 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 OR52J3Q8NH60 311 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 FNDC8Q8TC99 324 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 DNAJA3Q96EY1 480 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 FOXN4Q96NZ1 517 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ERVK-6Q9BXR3 956 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 KAT8Q9H7Z6 458 aaKnown RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 DCAF13Q9NV06 445 aaKnown RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 TDRD15B5MCY1 1934 aaKnown RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 TRAV9-2A0A087WT02 112 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 TTC26A0AVF1 554 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 SMPD2O60906 423 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 SH3BGRLO75368 114 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 TOM1L1O75674 476 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 KBTBD11O94819 623 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 NUDT14O95848 222 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 IFNB1P01574 187 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 ANXA4P09525 319 aaPredicted RBP2.66□□□□□ -1.98
LSM6-205ENST00000507449 SLC35G4P0C7Q5 338 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 RRASP10301 218 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 ADRA1AP35348 466 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 HSF2Q03933 536 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 PDZK1IP1Q13113 114 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 EXOSC2Q13868 293 aaKnown RBP2.66□□□□□ -1.98
LSM6-205ENST00000507449 TFDP1Q14186 410 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 ZIC1Q15915 447 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 P4HA3Q7Z4N8 544 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 CEACAM19Q7Z692 300 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 LHFPL4Q7Z7J7 247 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 ADCK1Q86TW2 530 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 SLC22A18ASQ8N1D0 253 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 ZBTB44Q8NCP5 570 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 BEST4Q8NFU0 473 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 OR2L2Q8NH16 312 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 TBC1D31Q96DN5 1066 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 MCCC1Q96RQ3 725 aaPredicted RBP2.66□□□□□ -1.98
LSM6-205ENST00000507449 UBXN6Q9BZV1 441 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 TRIM9Q9C026 710 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 GPN2Q9H9Y4 310 aaPredicted RBP2.66□□□□□ -1.98
LSM6-205ENST00000507449 CALHM2Q9HA72 323 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 MEPEQ9NQ76 525 aaPredicted RBP2.66□□□□□ -1.98
LSM6-205ENST00000507449 TRPV5Q9NQA5 729 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 ANKMY1Q9P2S6 941 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 GHRLQ9UBU3 117 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 MGAT4BQ9UQ53 548 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 AURKCQ9UQB9 309 aa2.66□□□□□ -1.98
LSM6-205ENST00000507449 CUX2O14529 1486 aa2.65□□□□□ -1.98
LSM6-205ENST00000507449 A0A087WWV3 80 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 A0A1B0GUL7 405 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 TRABD2BA6NFA1 517 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 LRRC30A6NM36 301 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 ANKRD30BLA7E2S9 258 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 WASHC1A8K0Z3 465 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 WASH3PC4AMC7 463 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 NPIPA2E9PIF3 369 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 SDHDO14521 159 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 TM9SF1O15321 606 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 SRPX2O60687 465 aaPredicted RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 VPS26AO75436 327 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 SCGB2A1O75556 95 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 HPP00738 406 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 PIGRP01833 764 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 NCF1P14598 390 aaPredicted RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 PVRP15151 417 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 PAICSP22234 425 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 CYLC1P35663 651 aaPredicted RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 PTGFRP43088 359 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 OR1D4P47884 311 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 STK19P49842 368 aaPredicted RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 HMGCS2P54868 508 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 MTTPP55157 894 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 TRA2BP62995 288 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 NOP14P78316 857 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 BNIP1Q12981 228 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 EIF2B1Q14232 305 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 BEND6Q5SZJ8 279 aaPredicted RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 WASH2PQ6VEQ5 465 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 ZNF600Q6ZNG1 722 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 TSEN54Q7Z6J9 526 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 NAXDQ8IW45 347 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms