RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 APIPQ96GX9 242 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 BTBD9Q96Q07 612 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF382Q96SR6 550 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 EBPLQ9BY08 206 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 ACPTQ9BZG2 426 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 TAS2R10Q9NYW0 307 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 FBXL2Q9UKC9 423 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 EDARQ9UNE0 448 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 GPR55Q9Y2T6 319 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 WIF1Q9Y5W5 379 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 GNG14A0A1W2PPG7 69 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 CLCA1A8K7I4 914 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 DLX3O60479 287 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 TSPAN2O60636 221 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ABCB7O75027 752 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 BCAS2O75934 225 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 CT45A8P0DMV1 189 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 CT45A9P0DMV2 189 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 DRD2P14416 443 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 TCEA1P23193 301 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 GCAP28676 217 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 IL12BP29460 328 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 SRD5A2P31213 254 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 TIA1P31483 386 aaKnown RBP eCLIP10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 GFRA1P56159 465 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ACSM2AQ08AH3 577 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 FOXD4Q12950 439 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ERCC6LQ2NKX8 1250 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 SPIN4Q56A73 249 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 CT45A2Q5DJT8 189 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ACSM2BQ68CK6 577 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 NPSR1Q6W5P4 371 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ADGRE4PQ86SQ3 457 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 LUZP2Q86TE4 346 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 PLCZ1Q86YW0 608 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 FAM9CQ8IZT9 166 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 METTL6Q8TCB7 284 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 C16orf78Q8WTQ4 265 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF592Q92610 1267 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ERP27Q96DN0 273 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 VSTM2LQ96N03 204 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 SFXN2Q96NB2 322 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ZFP3Q96NJ6 502 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ALPK1Q96QP1 1244 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 ADOQ96SZ5 270 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 TM9SF2Q99805 663 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 G6PC3Q9BUM1 346 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 SFXN3Q9BWM7 321 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 RBM24Q9BX46 236 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 FOLH1BQ9HBA9 442 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 GIMAP4Q9NUV9 329 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 GALNT8Q9NY28 637 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 CLCF1Q9UBD9 225 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 DKKL1Q9UK85 242 aa10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 HRNRQ86YZ3 2850 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-204ENST00000507293 SETD2Q9BYW2 2564 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 PCNX3Q9H6A9 2034 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 ULK1O75385 1050 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 RCBTB2O95199 551 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 RAF1P04049 648 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 ENO1P06733 434 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 ABHD2P08910 425 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 CTAGE8P0CG41 777 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 IMPDH1P20839 514 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 ATP5F1P24539 256 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 GRK2P25098 689 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 KRT20P35900 424 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 CPA2P48052 419 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 LHX2P50458 406 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 BTKQ06187 659 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF155Q12901 538 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 EFR3AQ14156 821 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 HEPACAMQ14CZ8 416 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 POU4F3Q15319 338 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 LGSNQ5TDP6 509 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 OR5M10Q6IEU7 315 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 AAGABQ6PD74 315 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 SCIMPQ6UWF3 145 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 TIFABQ6ZNK6 161 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 LARP4Q71RC2 724 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 CAMKMTQ7Z624 323 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 CTAGE4Q8IX94 777 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 SAMD14Q8IZD0 417 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 GCNT2Q8N0V5 402 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 GBP7Q8N8V2 638 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 MNS1Q8NEH6 495 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 OR7G2Q8NG99 324 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 RNF138Q8WVD3 245 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 WNT2BQ93097 391 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 EFHD2Q96C19 240 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 INTS12Q96CB8 462 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 MBD6Q96DN6 1003 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 MTBPQ96DY7 904 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 POM121Q96HA1 1249 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 KCNA7Q96RP8 456 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 YIPF4Q9BSR8 244 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 SLC35C2Q9NQQ7 365 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 SENP1Q9P0U3 644 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 STK38LQ9Y2H1 464 aa10.47□□□□□ -0.73
HMGCS1-204ENST00000507293 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms