RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF534Q76KX8 674 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 EXOC3L1Q86VI1 746 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 JAZF1Q86VZ6 243 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TDRPQ86YL5 185 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC50Q8IVM0 306 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 KLHDC8BQ8IXV7 354 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF595Q8IYB9 648 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC170Q8IYT3 715 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF567Q8N184 647 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SPATA6LQ8N4H0 392 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 DEFB108BQ8NET1 73 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ABHD11Q8NFV4 315 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 OR13J1Q8NGT2 312 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ADAMTS16Q8TE57 1224 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 UBASH3BQ8TF42 649 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 RNF138Q8WVD3 245 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 WDR60Q8WVS4 1066 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 DDB2Q92466 427 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 RAPGEF5Q92565 580 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ADIPOR1Q96A54 375 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 KTI12Q96EK9 354 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 DTNBP1Q96EV8 351 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 MRFAP1L1Q96HT8 127 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 FBXL20Q96IG2 436 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ADGRG7Q96K78 797 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CALR3Q96L12 384 aaKnown RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 RUNDC3BQ96NL0 473 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 NAP1L5Q96NT1 182 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 RNF157Q96PX1 679 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ALS2CR12Q96Q35 445 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 GPA33Q99795 319 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 VRK1Q99986 396 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 USB1Q9BQ65 265 aaKnown RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CHIAQ9BZP6 476 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TSGA10Q9BZW7 698 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 P2RY12Q9H244 342 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 C7orf69Q9H7B7 122 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SLC6A13Q9NSD5 602 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 DDX56Q9NY93 547 aaKnown RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 GPRC5BQ9NZH0 403 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 GALPQ9UBC7 116 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 FBXO9Q9UK97 447 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 POU2F3Q9UKI9 436 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 NUP50Q9UKX7 468 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ICAM5Q9UMF0 924 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF148Q9UQR1 794 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF337Q9Y3M9 751 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 PCDHB14Q9Y5E9 798 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SLC25A15Q9Y619 301 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TANC2Q9HCD6 1990 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 A0A087X0T9 212 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 A0A0G2JN53 185 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TRBC2A0A5B9 178 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TMEM129A0AVI4 362 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SRRM5B3KS81 715 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 APOL1O14791 398 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SEC14L5O43304 696 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HOXA3O43365 443 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 RGS14O43566 566 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 RP2O75695 350 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 GPANK1O95872 356 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PROCP04070 461 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 FAM228BP0C875 321 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 FCGR2AP12318 317 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CDH1P12830 882 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TNNT1P13805 278 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ZFXP17010 805 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 DDX5P17844 614 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 IGHV1-2P23083 117 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 MSNP26038 577 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ABCD3P28288 659 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ATP5DP30049 168 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CDC25BP30305 580 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HNRNPH1P31943 449 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HSD17B2P37059 387 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HNF4AP41235 474 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SLC1A1P43005 524 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF83P51522 516 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF75DP51815 510 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 GAS1P54826 345 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 LIM2P55344 173 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CTBP2P56545 445 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SNRPD2P62316 118 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SKP1P63208 163 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SLC25A3Q00325 362 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HMGCS1Q01581 520 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ID2Q02363 134 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 EGFEM1PQ0D2K5 195 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 GPS1Q13098 491 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CTBP1Q13363 440 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SNTA1Q13424 505 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TFDP2Q14188 446 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PDK2Q15119 407 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 STK11Q15831 433 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PHKG1Q16816 387 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TMEM44Q2T9K0 475 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ACSBG2Q5FVE4 666 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CTSL3PQ5NE16 218 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TCHHL1Q5QJ38 904 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 DEPDC1Q5TB30 811 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms