RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ETS1P14921 441 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 CHRNA3P32297 505 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 RGS19P49795 217 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 SLC25A1P53007 311 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 CXCL6P80162 114 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 SRYQ05066 204 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 EIF2B1Q14232 305 aaKnown RBP3□□□□□ -1.93
TOPBP1-204ENST00000505804 GSG1Q2KHT4 349 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 PARP6Q2NL67 630 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 LRIT3Q3SXY7 679 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 ACSF3Q4G176 576 aaPredicted RBP3□□□□□ -1.93
TOPBP1-204ENST00000505804 BEND6Q5SZJ8 279 aaPredicted RBP3□□□□□ -1.93
TOPBP1-204ENST00000505804 UTF1Q5T230 341 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 PNCKQ6P2M8 343 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 NEK5Q6P3R8 708 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 ELMOD2Q8IZ81 293 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 Q8N9G6 341 aaPredicted RBP3□□□□□ -1.93
TOPBP1-204ENST00000505804 FNDC8Q8TC99 324 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 U2AF1L4Q8WU68 220 aaKnown RBP3□□□□□ -1.93
TOPBP1-204ENST00000505804 CCDC47Q96A33 483 aaKnown RBP3□□□□□ -1.93
TOPBP1-204ENST00000505804 SPXQ9BT56 116 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 SLITRK2Q9H156 845 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3□□□□□ -1.93
TOPBP1-204ENST00000505804 IL20RAQ9UHF4 553 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 BCAP29Q9UHQ4 241 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 NTNG1Q9Y2I2 539 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 DHRS7Q9Y394 339 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 CROCCQ5TZA2 2017 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 NPIPA2E9PIF3 369 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 LCMT2O60294 686 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 GDF1P27539 372 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 PRDX2P32119 198 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 MDH2P40926 338 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 METAP1P53582 386 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 STARD6P59095 220 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 HERVK_113P63132 956 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 ERVK-8P63133 956 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 GAMTQ14353 236 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 OLFM4Q6UX06 510 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 P4HA3Q7Z4N8 544 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 ERICH1Q86X53 443 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 ARFGAP2Q8N6H7 521 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 TFB1MQ8WVM0 346 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 ERVK-6Q9BXR3 956 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 DCAF13Q9NV06 445 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 GDAP2Q9NXN4 497 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 PLA2G4CQ9UP65 541 aa2.99□□□□□ -1.93
TOPBP1-204ENST00000505804 FRG2CA6NGY1 282 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 GPAA1O43292 621 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 SLC2A10O95528 541 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 SLC35G4P0C7Q5 338 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 TSPAN8P19075 237 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 OR1D4P47884 311 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 ALDH3B2P48448 385 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 STK19P49842 368 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 SLC26A5P58743 744 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 MRPS6P82932 125 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 FUT7Q11130 342 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 ASAH1Q13510 395 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 SNX1Q13596 522 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 RAB35Q15286 201 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 TATDN1Q6P1N9 297 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 C11orf24Q96F05 449 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 SIGLEC12Q96PQ1 595 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 OR5M11Q96RB7 305 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 CARD6Q9BX69 1037 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 DEFB126Q9BYW3 111 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 ATG10Q9H0Y0 220 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 TMEM231Q9H6L2 316 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 NINJ2Q9NZG7 142 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 GHRLQ9UBU3 117 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 BARX2Q9UMQ3 279 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 GPRASP1Q5JY77 1395 aa2.98□□□□□ -1.93
TOPBP1-204ENST00000505804 UBE4BO95155 1302 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 IGHV3-35A0A0C4DH35 117 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 TTC26A0AVF1 554 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 H0YL77 283 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 SEC22BO75396 215 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 DUSP14O95147 198 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 TGFAP01135 160 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 RALAP11233 206 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 IGFBP5P24593 272 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 IL2RGP31785 369 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 RABIFP47224 123 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 ATXN3P54252 364 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 IGLV3-21P80748 117 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 IL18R1Q13478 541 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 PDIA5Q14554 519 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 PRR30Q53SZ7 412 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 PAN3Q58A45 887 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 LDLRAP1Q5SW96 308 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 C2orf66Q6UXQ4 117 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 ZNF562Q6V9R5 426 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 HACD2Q6Y1H2 254 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 PAQR9Q6ZVX9 377 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 NET1Q7Z628 596 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 CCDC36Q8IYA8 594 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 C11orf42Q8N5U0 333 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 FCGR1BQ92637 280 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms