RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TMEM81Q6P7N7 255 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 VWA1Q6PCB0 445 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 NUP54Q7Z3B4 507 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 LINC00528Q8N1L1 170 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 METTL4Q8N3J2 472 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PTGR2Q8N8N7 351 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 C7orf57Q8NEG2 295 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 C17orf47Q8NEP4 570 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 SPATA4Q8NEY3 305 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 OR7G1Q8NGA0 311 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 OR4F6Q8NGB9 312 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 OR14L1PQ8NHC6 308 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 SMPDL3BQ92485 455 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TMBIM1Q969X1 311 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ISL2Q96A47 359 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TM4SF18Q96CE8 201 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 REPS1Q96D71 796 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 STARD4Q96DR4 205 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CNRIP1Q96F85 164 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 LRRC46Q96FV0 321 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 LCORQ96JN0 433 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 COX4I2Q96KJ9 171 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ZNF681Q96N22 645 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 WFIKKN1Q96NZ8 548 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 FRG2BQ96QU4 278 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 HBEGFQ99075 208 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 SERPINI1Q99574 410 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 NAPGQ99747 312 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 SFXN3Q9BWM7 321 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 OSBPL11Q9BXB4 747 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 OR2B2Q9GZK3 357 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ACBD3Q9H3P7 528 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 WDR41Q9HAD4 459 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 BEX4Q9NWD9 120 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 KLHL28Q9NXS3 571 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PSD3Q9NYI0 1048 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TAS2R10Q9NYW0 307 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 KLRF1Q9NZS2 232 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 RNF14Q9UBS8 474 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 BCAP29Q9UHQ4 241 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PCTPQ9UKL6 214 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PYCARDQ9ULZ3 195 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 EDARQ9UNE0 448 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 EXO1Q9UQ84 846 aaKnown RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 TESMINQ9Y4I5 508 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PCDHA9Q9Y5H5 950 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 GPC6Q9Y625 555 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 DSCAMO60469 2012 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 A0A087X1B8 175 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 A0A1W2PNV4 684 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ESYT3A0FGR9 886 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 C1orf226A1L170 272 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PRAMEF25A6NGN4 478 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 CTIFO43310 598 aaKnown RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 TSPAN2O60636 221 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ERAL1O75616 437 aaKnown RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 CBR3O75828 277 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PDYNP01213 254 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ATP1B1P05026 303 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 GSTA2P09210 222 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 SBK3P0C264 359 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 RHOXF2BP0C7M4 288 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 CHN1P15882 459 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ZNF708P17019 499 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 NAGAP17050 411 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 CSNK2A2P19784 350 aaPredicted RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 DRD5P21918 477 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 LOXP28300 417 aaPredicted RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 PCSK6P29122 969 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ARL1P40616 181 aaPredicted RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 PAFAH1B1P43034 410 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PPICP45877 212 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 CPA2P48052 419 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 SUCLG1P53597 346 aaKnown RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 MAPK12P53778 367 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 GAS1P54826 345 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 CDH13P55290 713 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PHEXP78562 749 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PLCXD2Q0VAA5 305 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ACAP2Q15057 778 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 SF3B4Q15427 424 aaKnown RBP eCLIP5.29□□□□□ -1.567e-8■■■■■ 35
GYPB-205ENST00000505583 UAP1Q16222 522 aaPredicted RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 PRSS53Q2L4Q9 553 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 FAM83EQ2M2I3 478 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ZNF628Q5EBL2 1059 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 SHEQ5VZ18 495 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 LETMD1Q6P1Q0 360 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ZNF474Q6S9Z5 364 aaPredicted RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 NPSR1Q6W5P4 371 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 ZNF550Q7Z398 422 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 COMMD6Q7Z4G1 85 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 BTLAQ7Z6A9 289 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 IFNEQ86WN2 208 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PLCZ1Q86YW0 608 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 TMEM151AQ8N4L1 468 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 C1orf52Q8N6N3 182 aaKnown RBP5.29□□□□□ -1.56
GYPB-205ENST00000505583 OR4N2Q8NGD1 307 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 OR52R1Q8NGF1 315 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 OR5M1Q8NGP8 315 aa5.29□□□□□ -1.56
GYPB-205ENST00000505583 PPP1R14CQ8TAE6 165 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms