RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ATRAIDQ6UW56 229 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF841Q6ZN19 808 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC26A9Q7LBE3 791 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 PARGQ86W56 976 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 UBE2J2Q8N2K1 259 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 CHDHQ8NE62 594 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR10V1Q8NGI7 309 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR8J1Q8NGP2 316 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR1K1Q8NGR3 316 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 LMO3Q8TAP4 145 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 PCNPQ8WW12 178 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF486Q96H40 463 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 COQ2Q96H96 371 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 PIWIL1Q96J94 861 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 C7orf34Q96L11 122 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 NPAS2Q99743 824 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 GON7Q9BXV9 100 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 NFKBIZQ9BYH8 718 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 MEAF6Q9HAF1 191 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF71Q9NQZ8 489 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ETNK2Q9NVF9 386 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 BARHL2Q9NY43 387 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 PIPOXQ9P0Z9 390 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 EMCNQ9ULC0 261 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 NIP7Q9Y221 180 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 KLF2Q9Y5W3 355 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 A0A1W2PNV4 684 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 METTL21EPA6NDL7 271 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 GLTPD2A6NH11 291 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 NPIPB9F8W1W9 429 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 BLOC1S5-TXNDC5H3BN57 136 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF195O14628 629 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 STX7O15400 261 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 MED7O43513 233 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 DUSP11O75319 330 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 WBP4O75554 376 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 RHBDL1O75783 438 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 KRT36O76013 467 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 IGSF6O95976 241 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 OPN1LWP04000 364 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC2A3P11169 496 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ANXA3P12429 323 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 CALML3P27482 149 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 SSR1P43307 286 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 EMDP50402 254 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 PLA2G16P53816 162 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 HNRNPDQ14103 355 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 FASTKQ14296 549 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 GANABQ14697 944 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 RCN1Q15293 331 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAPK6Q16659 721 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 CYBRD1Q53TN4 286 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 AGAP7PQ5VUJ5 663 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 TAF3Q5VWG9 929 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF324BQ6AW86 544 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZSCAN25Q6NSZ9 544 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 SCYL2Q6P3W7 929 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 GCNT7Q6ZNI0 430 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ANKRD37Q7Z713 158 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 TMEM17Q86X19 198 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 VSTM4Q8IW00 320 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 CIARTQ8N365 385 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR4F5Q8NH21 305 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR52J3Q8NH60 311 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ART4Q93070 314 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 LHX4Q969G2 390 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 ADIPOR1Q96A54 375 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 RASD2Q96D21 266 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 USP28Q96RU2 1077 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 GPR174Q9BXC1 333 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 COMMD4Q9H0A8 199 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 HIPK2Q9H2X6 1198 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 SGK2Q9HBY8 427 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 DCAF13Q9NV06 445 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 RAB20Q9NX57 234 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 CDH9Q9ULB4 789 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 PPP1R3CQ9UQK1 317 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 TCF19Q9Y242 345 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 MRPS18CQ9Y3D5 142 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 CSNK1G3Q9Y6M4 447 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 GRIN2DO15399 1336 aa3.31□□□□□ -1.88
TRAPPC13-208ENST00000505553 GOLGA8OA6NCC3 632 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MFSD2BA6NFX1 497 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 LRRIQ4A6NIV6 560 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF716A6NP11 495 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 RNF212BA8MTL3 300 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 GOLGA8NF8WBI6 632 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 PDLIM1O00151 329 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 BTN3A3O00478 584 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 CASKO14936 926 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 FCMRO60667 390 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAGEC1O60732 1142 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF735P0CB33 412 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 PRSS56P0CW18 603 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MX1P20591 662 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 THBS3P49746 956 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC7A2P52569 658 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 SUCLG1P53597 346 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 PEX3P56589 373 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms