RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 OR1C1Q15619 314 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNHIT3Q15649 155 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 PLEKHN1Q494U1 663 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SPDYE7PQ495Y7 208 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 TIGD2Q4W5G0 525 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC6A19Q695T7 634 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 MFSD12Q6NUT3 480 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 IL20RBQ6UXL0 311 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 NPSR1Q6W5P4 371 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SZRD1Q7Z422 152 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 CYP4Z2PQ8N1L4 340 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 CDRT4Q8N9R6 151 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 GOLM1Q8NBJ4 401 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 VPS33AQ96AX1 596 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SPACA9Q96E40 222 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SPDL1Q96EA4 605 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ITCHQ96J02 903 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SGCZQ96LD1 299 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 PANX1Q96RD7 426 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 INPP5KQ9BT40 448 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 EPN3Q9H201 632 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 HPF1Q9NWY4 346 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ANKRD10Q9NXR5 420 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 A0A1W2PP18 115 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 RFXANKO14593 260 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC22A2O15244 555 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 CCDC22O60826 627 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 PPM1BO75688 479 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SOX30O94993 753 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 NKX2-2O95096 273 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 HMGN2P05204 90 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 KRT16P08779 473 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 ABCD3P28288 659 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SOAT1P35610 550 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 TMED10P49755 219 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 CORO7P57737 925 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 NFATC3Q12968 1075 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 TP53BP2Q13625 1128 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 NTRK2Q16620 822 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 VPS26BQ4G0F5 336 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 CYP27C1Q4G0S4 372 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SPINK14Q6IE38 97 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 RPUSD3Q6P087 351 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 RTL4Q6ZR62 310 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 C6orf120Q7Z4R8 191 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 PIGWQ7Z7B1 504 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 PTRH1Q86Y79 214 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC44A2Q8IWA5 706 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC34A3Q8N130 599 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 TRIML2Q8N7C3 387 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 GTF2H4Q92759 462 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 TMEM125Q96AQ2 219 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 SCMH1Q96GD3 660 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 C16orf58Q96GQ5 468 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 STACQ99469 402 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 ACTRT3Q9BYD9 372 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 FAM107BQ9H098 131 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 EQTNQ9NQ60 294 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 GPATCH2Q9NW75 528 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 GIN1Q9NXP7 522 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 ANAPC2Q9UJX6 822 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 VPS4AQ9UN37 437 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 KALRNO60229 2985 aa10.97□□□□□ -0.65
PDLIM5-208ENST00000504489 A0A096LPI6 279 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 RNF103-CHMP3A0A140T963 221 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 ASPDHA6ND91 283 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 NR5A2O00482 541 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 TSPAN2O60636 221 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC25A12O75746 678 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SP1P08047 785 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 ACP2P11117 423 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 CD1EP15812 388 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 CAPN3P20807 821 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 PTPN6P29350 595 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 GABRA3P34903 492 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 CDKN2CP42773 168 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 MAN2A2P49641 1150 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 KLF10Q13118 480 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 GAB1Q13480 694 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 LASP1Q14847 261 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 NNATQ16517 81 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF766Q5HY98 468 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SAXO2Q658L1 398 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC25A25Q6KCM7 469 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 CDC73Q6P1J9 531 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 GK5Q6ZS86 529 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF621Q6ZSS3 439 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 NUP54Q7Z3B4 507 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 MDGA2Q7Z553 956 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 WDR53Q7Z5U6 358 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 PRR22Q8IZ63 422 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 Q8NA96 180 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 TMEM178AQ8NBL3 297 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC16A11Q8NCK7 471 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 OR5AK3PQ8NH89 298 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 MIPOL1Q8TD10 442 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC9A6Q92581 669 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 OMA1Q96E52 524 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 NEURL3Q96EH8 262 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms