RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SYCE2Q6PIF2 218 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 ARSKQ6UWY0 536 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 CEP68Q76N32 757 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 CARFQ8N187 725 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 LILRA3Q8N6C8 439 aaPredicted RBP6.98□□□□□ -1.29
PDGFC-203ENST00000502773 HORMAD2Q8N7B1 307 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 OR4E2Q8NGC2 313 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 ST8SIA2Q92186 375 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 GTPBP3Q969Y2 492 aaKnown RBP6.98□□□□□ -1.29
PDGFC-203ENST00000502773 TMCO6Q96DC7 493 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 TREX2Q9BQ50 279 aaPredicted RBP6.98□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF559Q9BR84 538 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 TTYH2Q9BSA4 534 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 CCDC32Q9BV29 185 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 TRIM2Q9C040 744 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 WDR45Q9Y484 360 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 OR1A2Q9Y585 309 aa6.98□□□□□ -1.29
PDGFC-203ENST00000502773 SEMA4FO95754 770 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 OPN1SWP03999 348 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CTHP32929 405 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 MC1RQ01726 317 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 EEF1A2Q05639 463 aaKnown RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TSPAN31Q12999 210 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CAMK1Q14012 370 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TSC22D1Q15714 1073 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 C2orf27AQ580R0 203 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF362Q5T0B9 420 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 GTF2IRD2BQ6EKJ0 949 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 MRM1Q6IN84 353 aaKnown RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 RD3Q7Z3Z2 195 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 GTF2IRD2Q86UP8 949 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ENTHD1Q8IYW4 607 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 FAM26EQ8N5C1 309 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 C2orf73Q8N5S3 287 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 JPH3Q8WXH2 748 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ACOT11Q8WXI4 607 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 MAL2Q969L2 176 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 FAM131CQ96AQ9 280 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CHFRQ96EP1 664 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SLC25A19Q9HC21 320 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PRODH2Q9UF12 536 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 UGT2A1Q9Y4X1 527 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SLC22A7Q9Y694 548 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TRAV20A0A0B4J274 112 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 OR2A25A4D2G3 310 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 AKAP8O43823 692 aaKnown RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 MITFO75030 526 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PPM1BO75688 479 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 UBXN7O94888 489 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SNX4O95219 450 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 LCN1P31025 176 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PIGAP37287 484 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 GPR85P60893 370 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 VBP1P61758 197 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 DBPQ10586 325 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 MED22Q15528 200 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 LCN1P1Q5VSP4 162 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF544Q6NX49 715 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 USP53Q70EK8 1073 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF551Q7Z340 670 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TAF8Q7Z7C8 310 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CMIPQ8IY22 773 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SLC34A3Q8N130 599 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TBC1D15Q8TC07 691 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CREB3L4Q8TEY5 395 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 THRSPQ92748 146 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 UFD1Q92890 307 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 YIPF6Q96EC8 236 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 KLHDC7BQ96G42 594 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 GLIPR2Q9H4G4 154 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SOX17Q9H6I2 414 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 DUSP22Q9NRW4 184 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SLC6A13Q9NSD5 602 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 EVA1BQ9NVM1 165 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ACTR10Q9NZ32 417 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PIAS3Q9Y6X2 628 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PLXNA2O75051 1894 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 NUP210Q8TEM1 1887 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SPINT1O43278 529 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 XPNPEP2O43895 674 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 TMEM127O75204 238 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CYP7B1O75881 506 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ATE1O95260 518 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 GBAP04062 536 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 BMP1P13497 986 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 SERTAD2Q14140 314 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 LASP1Q14847 261 aaKnown RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PRRT3Q5FWE3 981 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 KIAA0895LQ68EN5 471 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF425Q6IV72 752 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PAQR7Q86WK9 346 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 COX18Q8N8Q8 333 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 OR52P1PQ8NH57 321 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 RSPRY1Q96DX4 576 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 RBM18Q96H35 190 aaKnown RBP6.97□□□□□ -1.29
PDGFC-203ENST00000502773 PIGUQ9H490 435 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 CPNE5Q9HCH3 593 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 HCN2Q9UL51 889 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 MMP17Q9ULZ9 603 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms