RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 ANKRD39Q53RE8 183 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 XKR6Q5GH73 641 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 PAGE2BQ5JRK9 111 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 LIPJQ5W064 366 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 ICE2Q659A1 982 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 HIST2H2AA3Q6FI13 130 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 FIGLAQ6QHK4 219 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 SPESP1Q6UW49 350 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 GPRIN3Q6ZVF9 776 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 USP43Q70EL4 1123 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 RPS27LQ71UM5 84 aaKnown RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 ADCK2Q7Z695 626 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 MILR1Q7Z6M3 343 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 TRIM73Q86UV7 250 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 KIRREL3Q8IZU9 778 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 KRT78Q8N1N4 520 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 AFAP1L2Q8N4X5 818 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 TBC1D19Q8N5T2 526 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 ZNF655Q8N720 491 aaPredicted RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 OR2L3Q8NG85 312 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 OR52N2Q8NGI0 321 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 OR2A1Q8NGT9 310 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 OR6Y1Q8NGX8 325 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 SLC5A11Q8WWX8 675 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 NEIL2Q969S2 332 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 PTCD3Q96EY7 689 aaKnown RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 TRMT61AQ96FX7 289 aaKnown RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 OR2A14Q96R47 310 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 OR4K3Q96R72 315 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 TRIB1Q96RU8 372 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 ZNF382Q96SR6 550 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 RHNO1Q9BSD3 238 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 DPH7Q9BTV6 452 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 NTMT1Q9BV86 223 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 RSPO3Q9BXY4 272 aaPredicted RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 PITPNM3Q9BZ71 974 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 SLC26A1Q9H2B4 701 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 EHD1Q9H4M9 534 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 GSTO2Q9H4Y5 243 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 NOL11Q9H8H0 719 aaKnown RBP4.72□□□□□ -1.65
FXN-205ENST00000498653 ACTR8Q9H981 624 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 PELI2Q9HAT8 420 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 ZBTB26Q9HCK0 441 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 TMEM184CQ9NVA4 438 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 THAP1Q9NVV9 213 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 CTSFQ9UBX1 484 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 POMT2Q9UKY4 750 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 WIF1Q9Y5W5 379 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 PRR14LQ5THK1 2151 aa4.72□□□□□ -1.65
FXN-205ENST00000498653 H7BY64 318 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 OR7A17O14581 309 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 CASKO14936 926 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 AZIN1O14977 448 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 HCRTR1O43613 425 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 ITM2AO43736 263 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 UGDHO60701 494 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 SNNO75324 88 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 LYPLA1O75608 230 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 OR4F21O95013 312 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 ESRRBO95718 433 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 TSPAN15O95858 294 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 CHEK2O96017 543 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 ENO1P06733 434 aaKnown RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 CHRNGP07510 517 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 VIMP08670 466 aaKnown RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 EPORP19235 508 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 CRYGSP22914 178 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 CXCR2P25025 360 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 HMOX2P30519 316 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 GRK3P35626 688 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 HNF4AP41235 474 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 GRIA3P42263 894 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 CASP2P42575 452 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 ZNF136P52737 540 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 GYS2P54840 703 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 PCBP3P57721 371 aaKnown RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 GNGT1P63211 74 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 PHEXP78562 749 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 REEP5Q00765 189 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 EGR3Q06889 387 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 GALNT1Q10472 559 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 IFT88Q13099 833 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 TRAF3Q13114 568 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 DOC2AQ14183 400 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 TBCCQ15814 346 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 ARL13AQ5H913 290 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 FCRLBQ6BAA4 426 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 TTC19Q6DKK2 380 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 SLC25A25Q6KCM7 469 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 MED27Q6P2C8 311 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 RNF111Q6ZNA4 994 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 RGS9BPQ6ZS82 235 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 NDUFAF7Q7L592 441 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 KRT77Q7Z794 578 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 TMPRSS11BQ86T26 416 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 MYLK4Q86YV6 388 aaPredicted RBP4.71□□□□□ -1.66
FXN-205ENST00000498653 CRLF3Q8IUI8 442 aa4.71□□□□□ -1.66
FXN-205ENST00000498653 CARFQ8N187 725 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms