RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SLC35A4Q96G79 324 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 APOPT1Q96IL0 206 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 METTL2AQ96IZ6 378 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 COL21A1Q96P44 957 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 TIMP4Q99727 224 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 FOLH1BQ9HBA9 442 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 NPDC1Q9NQX5 325 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 MKS1Q9NXB0 559 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 TAS2R9Q9NYW1 312 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 MAPRE3Q9UPY8 281 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 EXO1Q9UQ84 846 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 SLC6A5Q9Y345 797 aa7.74□□□□□ -1.17
HMGXB4-207ENST00000498212 A0A087WV62 115 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 HSPB2A8KAH6 182 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 NPIPB8E9PQR5 432 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SLC28A1O00337 649 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 AZIN1O14977 448 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 RGS14O43566 566 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TSPAN2O60636 221 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TRIM13O60858 407 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SEC22BO75396 215 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 NME6O75414 186 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CBR3O75828 277 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SLITRK5O94991 958 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 EPPINO95925 133 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CHEK2O96017 543 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 NUDT17P0C025 328 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CT45A8P0DMV1 189 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CT45A9P0DMV2 189 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 BMP7P18075 431 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 PRPH2P23942 346 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 GCKP35557 465 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 PNLIPRP2P54317 469 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 VSNL1P62760 191 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 PSG6Q00889 435 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TLE4Q04727 773 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 IFFO1Q0D2I5 559 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 ZNF155Q12901 538 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 EFR3AQ14156 821 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 KIAA0040Q15053 153 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SF3B4Q15427 424 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 HSPB2Q16082 182 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 PRSS53Q2L4Q9 553 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SLC25A35Q3KQZ1 300 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 ACSF3Q4G176 576 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CT45A2Q5DJT8 189 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TMEM107Q6UX40 140 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 NPSR1Q6W5P4 371 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SEM1Q6ZVN7 128 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 IKBIPQ70UQ0 350 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 LARP4Q71RC2 724 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 WDR53Q7Z5U6 358 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TRABD2AQ86V40 505 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 LACC1Q8IV20 430 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 LIX1LQ8IVB5 337 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 SLC44A2Q8IWA5 706 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 HOMEZQ8IX15 550 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 DMRTC2Q8IXT2 367 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CLYBLQ8N0X4 340 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 BANPQ8N9N5 519 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 FAM83FQ8NEG4 500 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 ABTB1Q969K4 478 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 DTNBP1Q96EV8 351 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 VSTM2LQ96N03 204 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 ADOQ96SZ5 270 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TRMOQ9BU70 441 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 GATA5Q9BWX5 397 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 UGT2B28Q9BY64 529 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 PRDM14Q9GZV8 571 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 GLIPR2Q9H4G4 154 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 MCCC2Q9HCC0 563 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 C1orf109Q9NX04 203 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 TAS2R7Q9NYW3 318 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CAMK2AQ9UQM7 478 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 WBP11Q9Y2W2 641 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 FIS1Q9Y3D6 152 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 OR10H1Q9Y4A9 318 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 CCL27Q9Y4X3 112 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 WIF1Q9Y5W5 379 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 PTGDR2Q9Y5Y4 395 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 MED12LQ86YW9 2145 aa7.73□□□□□ -1.17
HMGXB4-207ENST00000498212 KDM4EB2RXH2 506 aaPredicted RBP7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 UPK1AO00322 258 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 PLOD2O00469 737 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 ACTL6AO96019 429 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 IL2RAP01589 272 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 LINC00032P0C843 101 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 NEFHP12036 1026 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 CAPN3P20807 821 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 ALDH3A1P30838 453 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 TIMP3P35625 211 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 MC3RP41968 323 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 WNT3P56703 355 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 MRPS22P82650 360 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 RCAN2Q14206 197 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 ZNHIT3Q15649 155 aaPredicted RBP7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 SH2D4BQ5SQS7 431 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 DCST1Q5T197 706 aa7.72□□□□□ -1.17
HMGXB4-207ENST00000498212 KANK2Q63ZY3 851 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms