RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 IL12RB2Q99665 862 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 LITAFQ99732 161 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 CCT7Q99832 543 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PSD2Q9BQI7 771 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 EBF4Q9BQW3 602 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 MRPL45Q9BRJ2 306 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 ABHD6Q9BV23 337 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 MRPS26Q9BYN8 205 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 PPIL3Q9H2H8 161 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 COG4Q9H9E3 785 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 POPDC3Q9HBV1 291 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 ARMCX1Q9P291 453 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 EPS15L1Q9UBC2 864 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 TBC1D29Q9UFV1 150 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 WBP11Q9Y2W2 641 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 GMEB1Q9Y692 573 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PLXNB2O15031 1838 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 PATJQ8NI35 1801 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 A6NL46 340 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 OR6C76A6NM76 312 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 RNASEH1O60930 286 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 WISP3O95389 354 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 PIGNO95427 931 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 HSPA4LO95757 839 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 NPPAP01160 153 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CGAP01215 116 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 EPOP01588 193 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 IGLV1-44P01699 117 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 FGF4P08620 206 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 RBP1P09455 135 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 FAM200BP0CF97 657 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 FAM157CP0CG43 387 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 GOT1P17174 413 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ERCC2P18074 760 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ME2P23368 584 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 PSMB4P28070 264 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CRYBB1P53674 252 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 RAB10P61026 200 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 PPARDQ03181 441 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ACVR1Q04771 509 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 APOFQ13790 326 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CYLC2Q14093 348 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 GRB14Q14449 540 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CDO1Q16878 200 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 KCTD19Q17RG1 926 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 MDH1BQ5I0G3 518 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 FAM45BPQ6NSW5 357 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 PRMT9Q6P2P2 845 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 LINC00299Q6ZSB3 139 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CLEC20AQ6ZU45 233 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 USP50Q70EL3 339 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 CATSPER4Q7RTX7 472 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ANKRD23Q86SG2 305 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ACOT1Q86TX2 421 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 KCNMB4Q86W47 210 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 C10orf107Q8IVU9 208 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 FBXO16Q8IX29 292 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 AQP12AQ8IXF9 295 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 DEFB107AQ8IZN7 70 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 DEFB106AQ8N104 65 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CCDC185Q8N715 623 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 C12orf29Q8N999 325 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 LEMD2Q8NC56 503 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ZNF248Q8NDW4 579 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 GPRC5AQ8NFJ5 357 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 FAM45AQ8TCE6 357 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 RSPH1Q8WYR4 309 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 DCPSQ96C86 337 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 SLC45A3Q96JT2 553 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CNDP2Q96KP4 475 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 ZNF597Q96LX8 424 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 PRICKLE1Q96MT3 831 aaPredicted RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 ZMAT2Q96NC0 199 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 LGMNQ99538 433 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 RTP3Q9BQQ7 232 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 LMF2Q9BU23 707 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 SLC25A23Q9BV35 468 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 OSBPL11Q9BXB4 747 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 YTHDF1Q9BYJ9 559 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 SLC2A11Q9BYW1 496 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 TRIM4Q9C037 500 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 TRPV6Q9H1D0 765 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 MEAF6Q9HAF1 191 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 EML4Q9HC35 981 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 TREX1Q9NSU2 369 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ARMC1Q9NVT9 282 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CLIC5Q9NZA1 410 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 MRPL15Q9P015 296 aaKnown RBP4.31□□□□□ -1.72
SSR3-209ENST00000498205 TMEM216Q9P0N5 145 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 RIMS3Q9UJD0 308 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 OSGIN1Q9UJX0 560 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 CDH9Q9ULB4 789 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 ACOT9Q9Y305 439 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 PTPRDP23468 1912 aa4.31□□□□□ -1.72
SSR3-209ENST00000498205 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 C15orf38-AP3S2A0A0A6YYH1 394 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TCRBV3S1A0A5B6 114 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 HEATR9A2RTY3 570 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TRIM64BA6NI03 449 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms