RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ADIPOR1Q96A54 375 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 LMF1Q96S06 567 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 CDCP1Q9H5V8 836 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 NDE1Q9NXR1 346 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 MYOTQ9UBF9 498 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 GXYLT2A0PJZ3 443 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 TMEM200CA6NKL6 621 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 B2RBV5 119 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 NKX2-2O95096 273 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CT45A8P0DMV1 189 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CT45A9P0DMV2 189 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 OR12D1P0DN82 309 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 IL12BP29460 328 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 TRHRP34981 398 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-227ENST00000498056 PPICP45877 212 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 SSR4P51571 173 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 MVDP53602 400 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 PSME3P61289 254 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 POU6F2P78424 691 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-227ENST00000498056 FADDQ13158 208 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 RGNQ15493 299 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 ST3GAL2Q16842 350 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CT45A2Q5DJT8 189 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 ACER2Q5QJU3 275 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 GCNT6Q5T4J0 391 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 ATAD3BQ5T9A4 648 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 AGAP7PQ5VUJ5 663 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 NANOGP8Q6NSW7 305 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 ZCCHC12Q6PEW1 402 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CCDC121Q6ZUS5 278 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 GPR155Q7Z3F1 870 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 SLC34A3Q8N130 599 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 BEST3Q8N1M1 668 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 RBM15BQ8NDT2 890 aaKnown RBP12.54□□□□□ -0.4
CPNE1-227ENST00000498056 C17orf47Q8NEP4 570 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 ASB15Q8WXK1 588 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 PSMF1Q92530 271 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 EXTL1Q92935 676 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 OMA1Q96E52 524 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 ZNF354BQ96LW1 612 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 AGAP4Q96P64 663 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 RASL10BQ96S79 203 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 STACQ99469 402 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 PIGUQ9H490 435 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 NANOGQ9H9S0 305 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 DUSP22Q9NRW4 184 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 EXD2Q9NVH0 621 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CBLCQ9ULV8 474 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 GPR55Q9Y2T6 319 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-227ENST00000498056 L3MBTL1Q9Y468 752 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 CNTRLQ7Z7A1 2325 aa12.54□□□□□ -0.4
CPNE1-227ENST00000498056 TMEM247A6NEH6 219 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 A8MVJ9 347 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 HMGN4O00479 90 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ACOX3O15254 700 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ASNA1O43681 348 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 NADKO95544 446 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 AGR2O95994 175 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 F10P00742 488 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ALPPP05187 535 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 BCHEP06276 602 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 T-ENOLP0DO92 83 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 DRD5P21918 477 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 SLC6A2P23975 617 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ABCD3P28288 659 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 SOX11P35716 441 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 CASRP41180 1078 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 SOX3P41225 446 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 MAN2A2P49641 1150 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TMED10P49755 219 aaKnown RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 POLE2P56282 527 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 MLF1P58340 268 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 MRPS22P82650 360 aaKnown RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TBR1Q16650 682 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 DCST2Q5T1A1 773 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 CCNJQ5T5M9 372 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 H3F3CQ6NXT2 135 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 FIGNL1Q6PIW4 674 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 C19orf48Q6RUI8 117 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 BNC2Q6ZN30 1099 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 DEFB107AQ8IZN7 70 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 PGAM4Q8N0Y7 254 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 C10orf111Q8N326 155 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TMEM156Q8N614 296 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 HOXB13Q92826 284 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TMBIM1Q969X1 311 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 TMEM125Q96AQ2 219 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 EFHD2Q96C19 240 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 HSPBAP1Q96EW2 488 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms