RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PINK1Q9BXM7 581 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 AMBRA1Q9C0C7 1298 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC7A5P2Q9GIP4 190 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC38A1Q9H2H9 487 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 LRRN3Q9H3W5 708 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 RIBC2Q9H4K1 309 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF696Q9H7X3 374 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 FGF21Q9NSA1 209 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 KRT84Q9NSB2 600 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 DHCR7Q9UBM7 475 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SRPK3Q9UPE1 567 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SATB2Q9UPW6 733 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF443Q9Y2A4 671 aaPredicted RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 WDR45Q9Y484 360 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 MMACHCQ9Y4U1 282 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 PCDHGB5Q9Y5G0 923 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 KCNE3Q9Y6H6 103 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 A0A1W2PQM1 296 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PRAMEF25A6NGN4 478 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 D6RAR5 112 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 H3BMH7 237 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SYT5O00445 386 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 BCKDKO14874 412 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 KIAA0513O60268 411 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SMNDC1O75940 238 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SEC24DO94855 1032 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 GADD45GO95257 159 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 CLIC3O95833 236 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 IFNA16P05015 189 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 CYP4B1P13584 511 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PRKACGP22612 351 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PIGAP37287 484 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 STT3AP46977 705 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 OR1D4P47884 311 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 DUSP3P51452 185 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PGDP52209 483 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 HSD17B7P56937 341 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 RGS8P57771 180 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 POU6F2P78424 691 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ADARB1P78563 741 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ACY1Q03154 408 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SERTAD2Q14140 314 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNHIT3Q15649 155 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 DUSP7Q16829 419 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ARHGAP11BQ3KRB8 267 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 MINDY4Q4G0A6 757 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 EIPR1Q53HC9 387 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF311Q5JNZ3 666 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 TTC23Q5W5X9 447 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ANKRD34AQ69YU3 496 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 KDM4DQ6B0I6 523 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZCCHC12Q6PEW1 402 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 TTC33Q6PID6 262 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 DGAT2L6Q6ZPD8 337 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 TMPRSS9Q7Z410 1059 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 TSEN54Q7Z6J9 526 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 GALNT5Q7Z7M9 940 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 LACC1Q8IV20 430 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PEX5LQ8IYB4 626 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 C8orf59Q8N0T1 100 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF619Q8N2I2 560 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF786Q8N393 782 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC16A11Q8NCK7 471 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZBTB44Q8NCP5 570 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SIMC1Q8NDZ2 872 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 OR4D9Q8NGE8 314 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 OR4C15Q8NGM1 316 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 GIPC3Q8TF64 312 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 RIT1Q92963 219 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF501Q96CX3 271 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC35A4Q96G79 324 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PRRC1Q96M27 445 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 BARD1Q99728 777 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 MRPS26Q9BYN8 205 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF350Q9GZX5 532 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 QRSL1Q9H0R6 528 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ING2Q9H160 280 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PIGUQ9H490 435 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SMOC1Q9H4F8 434 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 CXorf21Q9HAI6 301 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 FOLH1BQ9HBA9 442 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ENAMQ9NRM1 1142 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 DUSP22Q9NRW4 184 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 TMEFF2Q9UIK5 374 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 KCND3Q9UK17 655 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 CDC14AQ9UNH5 594 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 ERVK-19Q9WJR5 959 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 MYRFQ9Y2G1 1151 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 POFUT2Q9Y2G5 429 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 TMEM184BQ9Y519 407 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 PCDHGB3Q9Y5G1 929 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 LAMA1P25391 3075 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 BDP1A6H8Y1 2624 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 USP34Q70CQ2 3546 aa7.53□□□□□ -1.2
PDZRN3-212ENST00000498048 SDK2Q58EX2 2172 aa7.52□□□□□ -1.21
PDZRN3-212ENST00000498048 ARRDC5A6NEK1 342 aa7.52□□□□□ -1.21
PDZRN3-212ENST00000498048 CTNSO60931 367 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms