RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 STK25O00506 426 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 RP2O75695 350 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF806P0C7X5 589 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC1A3P43003 542 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 GIPRP48546 466 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 MPP7Q5T2T1 576 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 RASGRP3Q8IV61 690 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 OR52N2Q8NGI0 321 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 HGDQ93099 445 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 PPCDCQ96CD2 204 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 TTTY10Q9BZA0 68 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 FBXW2Q9UKT8 454 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 DOCK1Q14185 1865 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 TNFRSF10BO14763 440 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 TAP2Q03519 686 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 TAF10Q12962 218 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 NAE1Q13564 534 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 HTR4Q13639 388 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 GPRC6AQ5T6X5 926 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF770Q6IQ21 691 aaPredicted RBP12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 CERS6Q6ZMG9 384 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 KRT78Q8N1N4 520 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 BVESQ8NE79 360 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 NANPQ8TBE9 248 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 WDR20Q8TBZ3 569 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 ADAMTS14Q8WXS8 1223 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 WRAP53Q9BUR4 548 aaKnown RBP12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 PLA2G12AQ9BZM1 189 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 ZFYVE1Q9HBF4 777 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 PRDM9Q9NQV7 894 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 RPS6KB2Q9UBS0 482 aa12.33□□□□□ -0.44
GAPVD1-220ENST00000497580 NUMA1Q14980 2115 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 XIRP2A4UGR9 3374 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 KCNE1BA0A087WTH5 132 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 DNASE2O00115 360 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ARPC1BO15143 372 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 WNT1P04628 370 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ANKRD34CP0C6C1 535 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 CD22P20273 847 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 IRS1P35568 1242 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 AKR1C2P52895 323 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PSMA6P60900 246 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 RPS13P62277 151 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 MC2RQ01718 297 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PTSQ03393 145 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 AKR1C1Q04828 323 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 FAM74A1Q5RGS3 127 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 FAAP20Q6NZ36 180 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 NHLRC1Q6VVB1 395 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 OVCH2Q7RTZ1 564 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 VRK3Q8IV63 474 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PDZD9Q8IXQ8 264 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 MMP21Q8N119 569 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 CHCHD4Q8N4Q1 142 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ZDHHC1Q8WTX9 485 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 FCRL1Q96LA6 429 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 FNDC11Q9BVV2 318 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 AUNIPQ9H7T9 357 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 KNL1Q8NG31 2342 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 A0A0C4DFX4 3053 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 CXCL11O14625 94 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 FZD7O75084 574 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 WDPCPO95876 746 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PODNL1Q6PEZ8 512 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRC70Q7Z2Q7 622 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 OXR1Q8N573 874 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 OR4K5Q8NGD3 323 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 WBP1Q96G27 269 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 IL26Q9NPH9 171 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 CA10Q9NS85 328 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 GULP1Q9UBP9 304 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 MYO7AQ13402 2215 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PGRMC2O15173 223 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 SMAD9O15198 467 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 NTN1O95631 604 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 GJA5P36382 358 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 LIMS1P48059 325 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRC73Q5JTD7 316 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 RNF219Q5W0B1 726 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 TCTN3Q6NUS6 607 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 PLA2G15Q8NCC3 412 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 OR51G2Q8NGK0 314 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF707Q96C28 371 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ADAM2Q99965 735 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ARHGAP9Q9BRR9 750 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 C20orf85Q9H1P6 137 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 ZSCAN32Q9NX65 697 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 SEC14L3Q9UDX4 400 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms