RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TMEM125Q96AQ2 219 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC7A6OSQ96CW6 309 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 OR7D2Q96RA2 312 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 THUMPD3Q9BV44 507 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 A4GALTQ9NPC4 353 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 CALML5Q9NZT1 146 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 PCDHGA9Q9Y5G4 932 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 HMGN4O00479 90 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 PTGER1P34995 402 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 GZMMP51124 257 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 ZNF155Q12901 538 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 VEZF1Q14119 521 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 ZNF630Q2M218 657 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 ARHGAP11BQ3KRB8 267 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 TMEM81Q6P7N7 255 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 TNIP2Q8NFZ5 429 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 AURKBQ96GD4 344 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 THOC3Q96J01 351 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 MAGED4Q96JG8 741 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 TRNT1Q96Q11 434 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 SECISBP2Q96T21 854 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 ECSITQ9BQ95 431 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 BTBD10Q9BSF8 475 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 G6PC3Q9BUM1 346 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 ITPAQ9BY32 194 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 OR51I1Q9H343 314 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 SERHL2Q9H4I8 314 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 ANKRA2Q9H9E1 313 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 HHATLQ9HCP6 504 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 L3MBTL1Q9Y468 752 aa18.26■□□□□ 0.51
SCAMP3-209ENST00000497470 PRKAR1AP10644 381 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 ACP2P11117 423 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 HSD17B1P14061 328 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 CPA2P48052 419 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 PNLIPRP2P54317 469 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 DSTNP60981 165 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 MXRA7P84157 204 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 CAPRIN1Q14444 709 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 FXNQ16595 210 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 DUSP5Q16690 384 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 SAMD4BQ5PRF9 694 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 OPN5Q6U736 354 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 IGFL2Q6UWQ7 119 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 SZRD1Q7Z422 152 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC34A3Q8N130 599 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 KIF2BQ8N4N8 673 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 HORMAD2Q8N7B1 307 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC35A4Q96G79 324 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 C16orf58Q96GQ5 468 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 REXO5Q96IC2 774 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 DCBLD2Q96PD2 775 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 SAP130Q9H0E3 1048 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 NXF5Q9H1B4 397 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 IKZF5Q9H5V7 419 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 IL1RL2Q9HB29 575 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 BCL2L10Q9HD36 194 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 ABI3Q9P2A4 366 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 P2RX2Q9UBL9 471 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 CBLCQ9ULV8 474 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 DTX4Q9Y2E6 619 aa18.25■□□□□ 0.51
SCAMP3-209ENST00000497470 OR6C70A6NIJ9 312 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 ARGFXA6NJG6 315 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 PRKNO60260 465 aaPredicted RBP18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 NADKO95544 446 aaPredicted RBP18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 NGFRP08138 427 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 TFPTP0C1Z6 253 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 ITGA3P26006 1051 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 GABRA3P34903 492 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 CRATP43155 626 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 POU6F2P78424 691 aaPredicted RBP18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 DECR1Q16698 335 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 ACER2Q5QJU3 275 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 AGAP7PQ5VUJ5 663 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 TCTN3Q6NUS6 607 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 BORAQ6PGQ7 559 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 NPSR1Q6W5P4 371 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 LRRC74BQ6ZQY2 392 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC44A2Q8IWA5 706 aaPredicted RBP18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 COX18Q8N8Q8 333 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 GPR151Q8TDV0 419 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC9A6Q92581 669 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 TTC9Q92623 222 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 SGCZQ96LD1 299 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 ZNF583Q96ND8 569 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 AGAP4Q96P64 663 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 SMAD5Q99717 465 aaKnown RBP18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 HOXD1Q9GZZ0 328 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 LRMDAQ9H2I8 198 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 EQTNQ9NQ60 294 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 CMTM6Q9NX76 183 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 PRDM4Q9UKN5 801 aa18.24■□□□□ 0.51
SCAMP3-209ENST00000497470 A8MVJ9 347 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 FAM220BPB1ANY3 271 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 GYG2O15488 501 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 IL33O95760 270 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 ALPPP05187 535 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 FBXO45P0C2W1 286 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms