RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OR1J4Q8NGS1 313 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 TMBIM1Q969X1 311 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 TMCO6Q96DC7 493 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 FCRL1Q96LA6 429 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 GNRHR2Q96P88 292 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 GATA5Q9BWX5 397 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-213ENST00000496347 FOLH1BQ9HBA9 442 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 LRTM1Q9HBL6 345 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 KCNJ16Q9NPI9 418 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 TMED5Q9Y3A6 229 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 CELSR1Q9NYQ6 3014 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 MED12Q93074 2177 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 PLOD2O00469 737 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 NPHS1O60500 1241 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 TRAPPC6AO75865 159 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 SLU7O95391 586 aaKnown RBP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 PSMG1O95456 288 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 JUNP05412 331 aaKnown RBP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 MSX1P28360 303 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 IL12BP29460 328 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 GCKP35557 465 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 SERPINB5P36952 375 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 MC3RP41968 323 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 TRPC1P48995 793 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 C2orf80Q0P641 193 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 KIAA0040Q15053 153 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 SF3B4Q15427 424 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 SLC25A35Q3KQZ1 300 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 ACSF3Q4G176 576 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 RIPPLY2Q5TAB7 128 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 NPSR1Q6W5P4 371 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 CCDC71Q8IV32 467 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 OR2L13Q8N349 312 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 MREGQ8N565 214 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 C14orf79Q96F83 325 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 FAM111AQ96PZ2 611 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 NODALQ96S42 347 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 PRDM14Q9GZV8 571 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 ANKRA2Q9H9E1 313 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 EML4Q9HC35 981 aaKnown RBP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 GALNT9Q9HCQ5 603 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 DDX18Q9NVP1 670 aaKnown RBP14.36□□□□□ -0.11
HDAC4-213ENST00000496347 WIF1Q9Y5W5 379 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 PTGDR2Q9Y5Y4 395 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 DOCK7Q96N67 2140 aa14.36□□□□□ -0.11
HDAC4-213ENST00000496347 A0A0G2JNJ9 132 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 ENO4A6NNW6 628 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 AHRRA9YTQ3 701 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 ICOSLGO75144 302 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 SEC22BO75396 215 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 TOXO94900 526 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 PTGDSP41222 190 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 ZFP36L2P47974 494 aaKnown RBP14.35□□□□□ -0.11
HDAC4-213ENST00000496347 TMEM107Q6UX40 140 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 MEX3BQ6ZN04 569 aaKnown RBP14.35□□□□□ -0.11
HDAC4-213ENST00000496347 LACC1Q8IV20 430 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 OR10Q1Q8NGQ4 319 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 RNF138Q8WVD3 245 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 AMDHD1Q96NU7 426 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 SLC24A3Q9HC58 644 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 NPDC1Q9NQX5 325 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-213ENST00000496347 Q9UFV3 132 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 C19orf53Q9UNZ5 99 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-213ENST00000496347 EXO1Q9UQ84 846 aaKnown RBP14.35□□□□□ -0.11
HDAC4-213ENST00000496347 OR10H1Q9Y4A9 318 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 DNAJC15Q9Y5T4 150 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 SPG11Q96JI7 2443 aa14.35□□□□□ -0.11
HDAC4-213ENST00000496347 NKX2-6A6NCS4 301 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 GNB5O14775 395 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 LSM1O15116 133 aaKnown RBP14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TSPAN2O60636 221 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 REM1O75628 298 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ACTL6AO96019 429 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 CHRNGP07510 517 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 FGF4P08620 206 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 SDC1P18827 310 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ADH7P40394 386 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 PNLIPRP2P54317 469 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 RPL38P63173 70 aaKnown RBP14.34□□□□□ -0.11
HDAC4-213ENST00000496347 PSG6Q00889 435 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TOMM20Q15388 145 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 CYP27C1Q4G0S4 372 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 VASNQ6EMK4 673 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 LARP4Q71RC2 724 aaKnown RBP eCLIP14.34□□□□□ -0.11
HDAC4-213ENST00000496347 SLC44A2Q8IWA5 706 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ZNF295-AS1Q8N0V1 137 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 FAM83FQ8NEG4 500 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-213ENST00000496347 OR2T11Q8NH01 316 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ZFP28Q8NHY6 868 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TCP10LQ8TDR4 215 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TWIST2Q8WVJ9 160 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 ADOQ96SZ5 270 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TIMP4Q99727 224 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TMEM109Q9BVC6 243 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 OR2B2Q9GZK3 357 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TUBB1Q9H4B7 451 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 GLIPR2Q9H4G4 154 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms