RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CHCHD6Q9BRQ6 235 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 WWTR1Q9GZV5 400 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 OR10A4Q9H209 315 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 SPNS1Q9H2V7 528 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 YY1AP1Q9H869 796 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 METTL7AQ9H8H3 244 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 COPS7BQ9H9Q2 264 aaPredicted RBP8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 NENFQ9UMX5 172 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 EPN1Q9Y6I3 576 aaPredicted RBP8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 NINQ8N4C6 2090 aa8.6□□□□□ -1.03
SMARCAL1-213ENST00000496037 ERI2A8K979 691 aaKnown RBP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 BTNL10A8MVZ5 291 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 CDC7O00311 574 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 CYR61O00622 381 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 LDB3O75112 727 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 SKAP2O75563 359 aaPredicted RBP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 IGKV3-11P04433 115 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 RBMXP38159 391 aaKnown RBP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 CASP3P42574 277 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 CLCN7P51798 805 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 CLDN18P56856 261 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 REEP5Q00765 189 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 ID2Q02363 134 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 RNF111Q6ZNA4 994 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 MBOAT1Q6ZNC8 495 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 ARL6IP6Q8N6S5 226 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 ANKRD53Q8N9V6 530 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 SLC5A11Q8WWX8 675 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 JADE3Q92613 823 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 HTRA1Q92743 480 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 DTNBP1Q96EV8 351 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 SNF8Q96H20 258 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 FBXL20Q96IG2 436 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 BTBD9Q96Q07 612 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 AIF1LQ9BQI0 150 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF747Q9BV97 191 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 OR2B2Q9GZK3 357 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 RASSF4Q9H2L5 321 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 SERHLQ9NQF3 203 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 SNX15Q9NRS6 342 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 TAS2R10Q9NYW0 307 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 CISD1Q9NZ45 108 aaKnown RBP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 MOCS1Q9NZB8 636 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 WWOXQ9NZC7 414 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 DAPP1Q9UN19 280 aa8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMARCAL1-213ENST00000496037 MED12Q93074 2177 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CTAGE15A4D2H0 777 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 E7EVH7 732 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 LINC01387J3KSC0 135 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 PJA2O43164 708 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 RGS9O75916 674 aaPredicted RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 KRT15P19012 456 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 PTNP21246 168 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 PIK3CBP42338 1070 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 LIMS1P48059 325 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CDH11P55287 796 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 LIM2P55344 173 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 NRG3P56975 720 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 ZNF844Q08AG5 666 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CTBP1Q13363 440 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 EBPQ15125 230 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 SLC18A3Q16572 532 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CASC4Q6P4E1 433 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 TRIM40Q6P9F5 258 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 TMEM64Q6YI46 380 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 FAM214BQ7L5A3 538 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 PIWIL4Q7Z3Z4 852 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CTAGE6Q86UF2 777 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 PALM2Q8IXS6 379 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 KLHDC8AQ8IYD2 350 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 UBQLNLQ8IYU4 475 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 SNX31Q8N9S9 440 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 FAM71DQ8N9W8 422 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 STEAP2Q8NFT2 490 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 GIMAP7Q8NHV1 300 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 KIF18AQ8NI77 898 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 FIG4Q92562 907 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 MRPL24Q96A35 216 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 RBM18Q96H35 190 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 TSNARE1Q96NA8 513 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 PIMREGQ9BSJ6 248 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 TRIM2Q9C040 744 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CCDC68Q9H2F9 335 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 METTL17Q9H7H0 456 aaPredicted RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 RNF122Q9H9V4 155 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 CHRAC1Q9NRG0 131 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 FAM53CQ9NYF3 392 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 FRRS1LQ9P0K9 344 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 SPACA6W5XKT8 324 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 YLPM1P49750 1951 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 WNK1Q9H4A3 2382 aa8.58□□□□□ -1.04
SMARCAL1-213ENST00000496037 HRKO00198 91 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 FRS3O43559 492 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 CBR3O75828 277 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 INMTO95050 263 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms