RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PPP2R5CQ13362 524 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 MLKLQ8NB16 471 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 COLGALT1Q8NBJ5 622 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 LHX4Q969G2 390 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 VSIG2Q96IQ7 327 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 OPN3Q9H1Y3 402 aaPredicted RBP3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 CARD9Q9H257 536 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 SLC17A2O00624 439 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 RANBP6O60518 1105 aaKnown RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 STAM2O75886 525 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 SLC2A10O95528 541 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 ECDO95905 644 aaPredicted RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 ACTL6AO96019 429 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 HOXB7P09629 217 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 PSMB1P20618 241 aaKnown RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 IDSP22304 550 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 MARCKSP29966 332 aaPredicted RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 TRIM23P36406 574 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 PITPNBP48739 271 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 TRPC1P48995 793 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 SLC26A2P50443 739 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 SSTP61278 116 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 NOP14P78316 857 aaKnown RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 IL9RQ01113 521 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 GFPT1Q06210 699 aaPredicted RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 EIF2B1Q14232 305 aaKnown RBP3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 CHCHD4Q8N4Q1 142 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM185AQ8NFB2 350 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 ACCSQ96QU6 501 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 TSPAN18Q96SJ8 248 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 HCAR1Q9BXC0 346 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 IL19Q9UHD0 177 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 FAM153AQ9UHL3 310 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 DNPEPQ9ULA0 475 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 KLHDC2Q9Y2U9 406 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 DHRS7Q9Y394 339 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 ZMYM6O95789 1325 aa3.63□□□□□ -1.83
NCKAP1-208ENST00000495619 TRBV7-9A0A0J9YWB2 115 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 CCDC69A6NI79 296 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 NPIPA2E9PIF3 369 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 LRP3O75074 770 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 WNT2P09544 360 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 ALPIP09923 528 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 DEKP35659 375 aaKnown RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 CASP9P55211 416 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 YBEYP58557 167 aaPredicted RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 HAND2P61296 217 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 GALK2Q01415 458 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF85Q03923 595 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF33BQ06732 778 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 PPP1R8Q12972 351 aaKnown RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 EIF4EBP2Q13542 120 aaPredicted RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 ETFRF1Q6IPR1 90 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 PRR5LQ6MZQ0 368 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 TFAP2EQ6VUC0 442 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 MCOLN2Q8IZK6 566 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 EXOC6Q8TAG9 804 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF564Q8TBZ8 553 aaPredicted RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 URGCPQ8TCY9 931 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM37Q8WXS4 190 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 SPATA13Q96N96 652 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 CBWD1Q9BRT8 395 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 MIEF1Q9NQG6 463 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 EXOSC3Q9NQT5 275 aaKnown RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 RPS6KB2Q9UBS0 482 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 KCNN3Q9UGI6 736 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 PDE10AQ9Y233 779 aa3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 STRAPQ9Y3F4 350 aaKnown RBP3.62□□□□□ -1.83
NCKAP1-208ENST00000495619 WI2-2373I1.2A0A1W2PRP0 233 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 PDLIM1O00151 329 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ZBTB14O43829 449 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 KRT6AP02538 564 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 MT-ND3P03897 115 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 KRT6BP04259 564 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ZP3P21754 424 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ALDH3B2P48448 385 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 KRT6CP48668 564 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 CCL11P51671 97 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 CLPPQ16740 277 aaPredicted RBP3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 GLYR1Q49A26 553 aaPredicted RBP3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 LGSNQ5TDP6 509 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 CASC1Q6TDU7 716 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ADAMTSL5Q6ZMM2 481 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 C1orf186Q6ZWK4 172 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 MOB1BQ7L9L4 216 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ADAMTSL2Q86TH1 951 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF677Q86XU0 584 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 RNF175Q8N4F7 328 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 APOOQ9BUR5 198 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 C19orf24Q9BVV8 132 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 THAP9Q9H5L6 903 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 HPS4Q9NQG7 708 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 PLSCR3Q9NRY6 295 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 HOMER3Q9NSC5 361 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 STARD5Q9NSY2 213 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM9Q9P0T7 183 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF175Q9Y473 711 aa3.61□□□□□ -1.83
NCKAP1-208ENST00000495619 BUB1O43683 1085 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 HSF2BPO75031 334 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms