RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 OLR1P78380 273 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 PPP2R2BQ00005 443 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 SPIBQ01892 262 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 MAP4K2Q12851 820 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 FOXC1Q12948 553 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 LARS2Q15031 903 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 GPR19Q15760 415 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ZSWIM7Q19AV6 140 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ARHGAP11BQ3KRB8 267 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 EIPR1Q53HC9 387 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CCDC157Q569K6 752 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF628Q5EBL2 1059 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 MFSD12Q6NUT3 480 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 UGT2A3Q6UWM9 527 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ARHGAP22Q7Z5H3 698 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CARM1Q86X55 608 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CHERPQ8IWX8 916 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 GALNT12Q8IXK2 581 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 PEX5LQ8IYB4 626 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ATG16L2Q8NAA4 619 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 PHF10Q8WUB8 498 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 SLC9A6Q92581 669 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 KAT2AQ92830 837 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 RMND5BQ96G75 393 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 SLC41A2Q96JW4 573 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 COL21A1Q96P44 957 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CSF3RQ99062 836 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 TREX2Q9BQ50 279 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 MRPS26Q9BYN8 205 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ING2Q9H160 280 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 PIGUQ9H490 435 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF768Q9H5H4 540 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF696Q9H7X3 374 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 SYNPO2LQ9H987 977 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 POLR1BQ9H9Y6 1135 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 DUSP22Q9NRW4 184 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 KRT84Q9NSB2 600 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 STARD5Q9NSY2 213 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CUTCQ9NTM9 273 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 PDP1Q9P0J1 537 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 KLHL3Q9UH77 587 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 BLOC1S6Q9UL45 172 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ABCG2Q9UNQ0 655 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 SATB2Q9UPW6 733 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 MMACHCQ9Y4U1 282 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 HSPE1-MOB4S4R3N1 261 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 IGHV5-10-1A0A0J9YXX1 117 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ARRDC5A6NEK1 342 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 WASHC1A8K0Z3 465 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 PLD2O14939 933 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF749O43361 778 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 FOXS1O43638 330 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 HYAL3O43820 417 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 KIF1CO43896 1103 aaKnown RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 FGF17O60258 216 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 LDB3O75112 727 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 STX11O75558 287 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 JRKO75564 520 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 GCM2O75603 506 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 H6PDO95479 791 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 HBQ1P09105 142 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 SEPHS1P49903 392 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 HMGA2P52926 109 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ADARB1P78563 741 aaKnown RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 TARDBPQ13148 414 aaKnown RBP eCLIP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 SYPL1Q16563 259 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF750Q32MQ0 723 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 COLEC12Q5KU26 742 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 NKAIN2Q5VXU1 208 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 MED25Q71SY5 747 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 PRSS41Q7RTY9 318 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 GALNT10Q86SR1 603 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 OR4N5Q8IXE1 308 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 VWA5B2Q8N398 1253 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ARHGEF39Q8N4T4 335 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 OR7G2Q8NG99 324 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 OR5D16Q8NGK9 328 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 OR10Q1Q8NGQ4 319 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 RIT1Q92963 219 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 PEX11GQ96HA9 241 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ART5Q96L15 291 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 APOL4Q9BPW4 351 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 SCNM1Q9BWG6 230 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 ALOXE3Q9BYJ1 711 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 FAM192AQ9GZU8 254 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 SYNDIG1Q9H7V2 258 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 EQTNQ9NQ60 294 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 FAM118AQ9NWS6 357 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 TUBA8Q9NY65 449 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 NDUFAF4Q9P032 175 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 NDOR1Q9UHB4 597 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 CFL2Q9Y281 166 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 POFUT2Q9Y2G5 429 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 MRPS2Q9Y399 296 aaKnown RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 U3KQV3 271 aa9.58□□□□□ -0.88
HDAC3-214ENST00000495485 DSPP15924 2871 aaKnown RBP9.58□□□□□ -0.88
HDAC3-214ENST00000495485 CCDC88CQ9P219 2028 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 A0A087WXM4 84 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms