RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ARMCX1Q9P291 453 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 MIOXQ9UGB7 285 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 IL20RAQ9UHF4 553 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 FKBP7Q9Y680 259 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 AHDC1Q5TGY3 1603 aaPredicted RBP3.52□□□□□ -1.85
SMC4-224ENST00000494612 ARHGEF5Q12774 1597 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ZMYM6O95789 1325 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 FAM205AQ6ZU69 1335 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.51□□□□□ -1.85
SMC4-224ENST00000494612 TDRD15B5MCY1 1934 aaKnown RBP3.51□□□□□ -1.85
SMC4-224ENST00000494612 CYB561D2O14569 222 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 RENP00797 406 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 CXCL10P02778 98 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 GSTA1P08263 222 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 GHRP10912 638 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 GATA2P23769 480 aaPredicted RBP3.51□□□□□ -1.85
SMC4-224ENST00000494612 IL4RP24394 825 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 PTPN4P29074 926 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 PPP2R1BP30154 601 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 MAT2AP31153 395 aaKnown RBP3.51□□□□□ -1.85
SMC4-224ENST00000494612 MATKP42679 507 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 LMO4P61968 165 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 CEBPEQ15744 281 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 PCK2Q16822 640 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 CNPY1Q3B7I2 92 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ANKRD55Q3KP44 614 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ZNF528Q3MIS6 628 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 PARP10Q53GL7 1025 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 NHLRC3Q5JS37 347 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ZNF506Q5JVG8 444 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ACER2Q5QJU3 275 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ABRAXAS1Q6UWZ7 409 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ADAMTSL5Q6ZMM2 481 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 DPY19L2P2Q6ZN68 376 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 AMZ2Q86W34 360 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 KDM8Q8N371 416 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 POM121L12Q8N7R1 296 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ITLN1Q8WWA0 313 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 TOMM40LQ969M1 308 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 FAM111AQ96PZ2 611 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 RBM24Q9BX46 236 aaKnown RBP3.51□□□□□ -1.85
SMC4-224ENST00000494612 TMEM231Q9H6L2 316 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 ALG9Q9H6U8 611 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 RPS10P5Q9NQ39 176 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 DHRS4-AS1Q9P1J3 65 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 TUBGCP4Q9UGJ1 667 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 HOOK1Q9UJC3 728 aaKnown RBP3.51□□□□□ -1.85
SMC4-224ENST00000494612 SPATA2Q9UM82 520 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 TET3O43151 1660 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 CEP162Q5TB80 1403 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 MROH1Q8NDA8 1641 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 PCNX3Q9H6A9 2034 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 KANK1Q14678 1352 aa3.51□□□□□ -1.85
SMC4-224ENST00000494612 CHD2O14647 1828 aaKnown RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 CCT8L1PA6NM43 557 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 MCF2LO15068 1137 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 PRPSAP2O60256 369 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 GATA1P15976 413 aaPredicted RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 TSPAN8P19075 237 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 PRDX2P32119 198 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 SAA4P35542 130 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 CAMLGP49069 296 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 SGSHP51688 502 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 PRELPP51888 382 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 IST1P53990 364 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 HAND2P61296 217 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 NOP14P78316 857 aaKnown RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 GABPB1Q06547 395 aaPredicted RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 IDI1Q13907 227 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 RFTN1Q14699 578 aaPredicted RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 SLC22A6Q4U2R8 563 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 CCDC92Q53HC0 331 aaPredicted RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 TCTEX1D4Q5JR98 221 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 SEL1L2Q5TEA6 688 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 REP15Q6BDI9 236 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 RHBDD2Q6NTF9 364 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 NEK5Q6P3R8 708 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 GPBP1Q86WP2 473 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 HIPK1Q86Z02 1210 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 ZNF397Q8NF99 534 aaPredicted RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 OR6T1Q8NGN1 323 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 RBM18Q96H35 190 aaKnown RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 SAMD8Q96LT4 415 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 FTHL17Q9BXU8 183 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 RAB17Q9H0T7 212 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 C1orf21Q9H246 121 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 PIN4Q9Y237 131 aaKnown RBP3.5□□□□□ -1.85
SMC4-224ENST00000494612 ARHGAP31Q2M1Z3 1444 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 DIP2AQ14689 1571 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 MAST1Q9Y2H9 1570 aa3.5□□□□□ -1.85
SMC4-224ENST00000494612 ADGRB3O60242 1522 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 DUOX2Q9NRD8 1548 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 A0A0A6YYD4 124 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 TRABD2BA6NFA1 517 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 E9PAM4 449 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 SDC3O75056 442 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 MELTFP08582 738 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 FOLR2P14207 255 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms