RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 WASHC1A8K0Z3 465 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 TMPRSS11DO60235 418 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 MGRN1O60291 552 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRKRAO75569 313 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 NPPAP01160 153 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 IL3P08700 152 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 CD46P15529 392 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 ME2P23368 584 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SLC6A2P23975 617 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SSR2P43308 183 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 MAPK12P53778 367 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 WNT3P56703 355 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 STXBP1P61764 594 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZNF385BQ569K4 471 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SAMD4BQ5PRF9 694 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 C1orf146Q5VVC0 180 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 NANOGP8Q6NSW7 305 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRIM40Q6P9F5 258 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 DNAJC14Q6Y2X3 702 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 MSANTD1Q6ZTZ1 278 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 IKBIPQ70UQ0 350 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 CAMKMTQ7Z624 323 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 CD163Q86VB7 1156 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 ANKRD46Q86W74 232 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SLC15A3Q8IY34 581 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SLC5A8Q8N695 610 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SRFBP1Q8NEF9 429 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 OR2L5Q8NG80 312 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 OR8J2Q8NGG1 315 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 UCN3Q969E3 161 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 TMEM125Q96AQ2 219 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 ITCHQ96J02 903 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 MAGED4Q96JG8 741 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRPF18Q99633 342 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 CGREF1Q99674 301 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 INPP5KQ9BT40 448 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 TBCDQ9BTW9 1192 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 UCK2Q9BZX2 261 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 DDX31Q9H8H2 851 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRIM45Q9H8W5 580 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 NANOGQ9H9S0 305 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SERHLQ9NQF3 203 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRDM9Q9NQV7 894 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRDM7Q9NQW5 492 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 FAM120CQ9NX05 1096 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 CMTM6Q9NX76 183 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 KCMF1Q9P0J7 381 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SH3BP4Q9P0V3 963 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 GMPR2Q9P2T1 348 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 ABCD2Q9UBJ2 740 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 SUCOQ9UBS9 1254 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 TEKT2Q9UIF3 430 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 POMPQ9Y244 141 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 PCDHGB6Q9Y5F9 930 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZNF469Q96JG9 3925 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 A0A096LPI6 279 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 NKX2-6A6NCS4 301 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRORSD1PA6NEY8 169 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 HRKO00198 91 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CYR61O00622 381 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 NME4O00746 187 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CDC40O60508 579 aaKnown RBP eCLIP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 SCN2BO60939 215 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ENTPD5O75356 428 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ITGA10O75578 1167 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 OR6B1O95007 311 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CPSF4O95639 269 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ATP6V1G2O95670 118 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CYC1P08574 325 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CELA3AP09093 270 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 RNH1P13489 461 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ABOP16442 354 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZNF24P17028 368 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 TCN1P20061 433 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 EFNA1P20827 205 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRHRP34981 398 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 MSX2P35548 267 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 RPL3P39023 403 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CDKN2CP42773 168 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 GSTM5P46439 218 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CYB561P49447 251 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 HLCSP50747 726 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ARFIP1P53367 373 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRA2BP62995 288 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 TGM3Q08188 693 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 RIPK1Q13546 671 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 SNTB1Q13884 538 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 PDE7AQ13946 482 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 SELPLGQ14242 412 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRSS53Q2L4Q9 553 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZNF750Q32MQ0 723 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 GTDC1Q4AE62 458 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 RABL3Q5HYI8 236 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ABHD13Q7L211 337 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 R3HCC1LQ7Z5L2 792 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CCDC71Q8IV32 467 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CLECL1Q8IZS7 167 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 MMP21Q8N119 569 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ACOT4Q8N9L9 421 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms