RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SHC1P29353 583 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 TLX1P31314 330 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 AKT2P31751 481 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 PRKCIP41743 596 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ARSEP51690 589 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 THOP1P52888 689 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 F2RL1P55085 397 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 GFERP55789 205 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 SNX16P57768 344 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 OR1D5P58170 312 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 PFN3P60673 137 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 KRT83P78385 493 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MPP1Q00013 466 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ATMQ13315 3056 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MFAP5Q13361 173 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CCNG2Q16589 344 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MEA1Q16626 185 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CTU2Q2VPK5 515 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC122Q5T0U0 273 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MPP7Q5T2T1 576 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 LRRC66Q68CR7 880 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 FAAH2Q6GMR7 532 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MFSD7Q6UXD7 560 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CLEC17AQ6ZS10 378 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 C1orf122Q6ZSJ8 110 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 STRADAQ7RTN6 431 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 TMEM135Q86UB9 458 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 HEATR4Q86WZ0 1026 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 GPALPP1Q8IXQ4 340 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ATPAF2Q8N5M1 289 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 SPC24Q8NBT2 197 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 LPCAT1Q8NF37 534 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 OR4C6Q8NH72 309 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF564Q8TBZ8 553 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 HTR3CQ8WXA8 447 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 HDAC2Q92769 488 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CENPTQ96BT3 561 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 GDAP1L1Q96MZ0 367 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CTRCQ99895 268 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 PKP2Q99959 881 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 DDX50Q9BQ39 737 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC3Q9BQI4 270 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CNPY3Q9BT09 278 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 TBC1D10AQ9BXI6 508 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 FAM96AQ9H5X1 160 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 FAM124BQ9H5Z6 455 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 RANGRFQ9HD47 186 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 APMAPQ9HDC9 416 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ASCL3Q9NQ33 180 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 WASH6PQ9NQA3 447 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 DYRK4Q9NR20 520 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 FAM120CQ9NX05 1096 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 RCC2Q9P258 522 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 PISDQ9UG56 409 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 SLC12A6Q9UHW9 1150 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 KCNK6Q9Y257 313 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CRYL1Q9Y2S2 319 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 HEY1Q9Y5J3 304 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MRPS18BQ9Y676 258 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 DNAJC13O75165 2243 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 MPDZO75970 2070 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CFAP46Q8IYW2 2715 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 LAMA5O15230 3695 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SETXQ7Z333 2677 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 HELZ2Q9BYK8 2649 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TEX13DA0A0J9YY54 714 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SPTY2D1-AS1A0A0U1RR47 76 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TSPAN11A1L157 253 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 MACROD2A1Z1Q3 448 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 OR51F1A6NGY5 319 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 D6RAR5 112 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TRAFD1O14545 582 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 FPGTO14772 594 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 B4GAT1O43505 415 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PRPSAP2O60256 369 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PAGE4O60829 102 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ALOX12BO75342 701 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SLC25A12O75746 678 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PALMO75781 387 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SEC14L2O76054 403 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 MBD3O95983 291 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 JCHAINP01591 159 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 FRMD6-AS1P0C7T7 363 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SLC2A3P11169 496 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ETS1P14921 441 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ABCD3P28288 659 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 NNMTP40261 264 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 CD86P42081 329 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 LEPRP48357 1165 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 GSCP56915 257 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 UBASH3AP57075 661 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 RPS18P62269 152 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SULT2A1Q06520 285 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 CHAF1BQ13112 559 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 RIGQ13278 110 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 NFATC2Q13469 925 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 FRG1Q14331 258 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF235Q14590 738 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ISXQ2M1V0 245 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms