RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 PIK3R3Q92569 461 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 RAB8BQ92930 207 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 VSTM2LQ96N03 204 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 CPPED1Q9BRF8 314 aaPredicted RBP15.91■□□□□ 0.14
LIME1-208ENST00000493265 NXF5Q9H1B4 397 aaKnown RBP15.91■□□□□ 0.14
LIME1-208ENST00000493265 OR51I1Q9H343 314 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 SERHL2Q9H4I8 314 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 OR10H1Q9Y4A9 318 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 NUP214P35658 2090 aaPredicted RBP15.91■□□□□ 0.14
LIME1-208ENST00000493265 TRBV5-3A0A0A0MS03 114 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 TMEM200CA6NKL6 621 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 EVPLLA8MZ36 301 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 FXYD1O00168 92 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 OR2J2O76002 312 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 OR12D1P0DN82 309 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 T-ENOLP0DO92 83 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 ETFAP13804 333 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 CALB2P22676 271 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 KHKP50053 298 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 MNAT1P51948 309 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 SLC25A3Q00325 362 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 DUSP5Q16690 384 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 RABL3Q5HYI8 236 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 NANOGP8Q6NSW7 305 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 JMJD6Q6NYC1 403 aaPredicted RBP15.9■□□□□ 0.14
LIME1-208ENST00000493265 CDC73Q6P1J9 531 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 BORAQ6PGQ7 559 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 NPSR1Q6W5P4 371 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 GALNT10Q86SR1 603 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 HORMAD2Q8N7B1 307 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 OR4N2Q8NGD1 307 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 OR8K3Q8NH51 312 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 PSMF1Q92530 271 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 CDS1Q92903 461 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 ADIPOR1Q96A54 375 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 ROPN1LQ96C74 230 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 LCORQ96JN0 433 aaPredicted RBP15.9■□□□□ 0.14
LIME1-208ENST00000493265 ANKRD27Q96NW4 1050 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 OR7D2Q96RA2 312 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 IKZF5Q9H5V7 419 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 PIF1Q9H611 641 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 NANOGQ9H9S0 305 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 KCNE3Q9Y6H6 103 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 BSNQ9UPA5 3926 aa15.9■□□□□ 0.14
LIME1-208ENST00000493265 TLN1Q9Y490 2541 aaKnown RBP15.9■□□□□ 0.14
LIME1-208ENST00000493265 GXYLT2A0PJZ3 443 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 EBAG9O00559 213 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 ITGA10O75578 1167 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 F10P00742 488 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 NPPAP01160 153 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 ITGB2P05107 769 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 KRT16P08779 473 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
LIME1-208ENST00000493265 PPICP45877 212 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 PSME3P61289 254 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 PSG6Q00889 435 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 GABPB1Q06547 395 aaPredicted RBP15.89■□□□□ 0.13
LIME1-208ENST00000493265 TBR1Q16650 682 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 ABHD17BQ5VST6 288 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 C6orf89Q6UWU4 347 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 COX18Q8N8Q8 333 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 FDCSPQ8NFU4 85 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 OR52N2Q8NGI0 321 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 NUBPLQ8TB37 319 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 XAGE5Q8WWM1 108 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 RMND5BQ96G75 393 aaPredicted RBP15.89■□□□□ 0.13
LIME1-208ENST00000493265 SLC35A4Q96G79 324 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 LMF1Q96S06 567 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 LMF2Q9BU23 707 aaKnown RBP15.89■□□□□ 0.13
LIME1-208ENST00000493265 RAD21L1Q9H4I0 556 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 Q9N2J8 555 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 MYOTQ9UBF9 498 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 GPR55Q9Y2T6 319 aaPredicted RBP15.89■□□□□ 0.13
LIME1-208ENST00000493265 UBR5O95071 2799 aaPredicted RBP15.89■□□□□ 0.13
LIME1-208ENST00000493265 PTPN13Q12923 2485 aa15.89■□□□□ 0.13
LIME1-208ENST00000493265 FRG2CA6NGY1 282 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 CT45A8P0DMV1 189 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 CT45A9P0DMV2 189 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 DRD5P21918 477 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 SOX11P35716 441 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 MLF1P58340 268 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 DCAF7P61962 342 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 RGNQ15493 299 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 MEP1AQ16819 746 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 CT45A2Q5DJT8 189 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 ACER2Q5QJU3 275 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 AGAP7PQ5VUJ5 663 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 H3F3CQ6NXT2 135 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 APLFQ8IW19 511 aaPredicted RBP15.88■□□□□ 0.13
LIME1-208ENST00000493265 TAGAPQ8N103 731 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 ZNF441Q8N8Z8 693 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 ZNF354BQ96LW1 612 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 AGAP4Q96P64 663 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 BTBD9Q96Q07 612 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 ANKRD10Q9NXR5 420 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 STMN3Q9NZ72 180 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 TEKT2Q9UIF3 430 aa15.88■□□□□ 0.13
LIME1-208ENST00000493265 L3MBTL1Q9Y468 752 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms