RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 ACOT7O00154 380 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 UBDO15205 165 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 ATP1B1P05026 303 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 IL3P08700 152 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 BCKDHAP12694 445 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 PORP16435 677 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 FEN1P39748 380 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 ASMTP46597 345 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 ARFIP2P53365 341 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 FBXW4P57775 412 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 C2orf80Q0P641 193 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 HEPACAMQ14CZ8 416 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 KIAA0040Q15053 153 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 LTB4RQ15722 352 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 PRICKLE4Q2TBC4 344 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 GXYLT1Q4G148 440 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 FNDC7Q5VTL7 733 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 BICRALQ6AI39 1079 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 RTL6Q6ICC9 239 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 LARP4Q71RC2 724 aaKnown RBP eCLIP11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 MAVSQ7Z434 540 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM9CQ8IZT9 166 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 LRRC25Q8N386 305 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 LIX1Q8N485 282 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM13CQ8NE31 585 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 OR5M9Q8NGP3 310 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 OR5M3Q8NGP4 307 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 CLHC1Q8NHS4 586 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 ACTRT2Q8TDY3 377 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 TP53INP1Q96A56 240 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 SDCCAG3Q96C92 435 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 CNRIP1Q96F85 164 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 TSSK3Q96PN8 268 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 OR52B2Q96RD2 323 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 TMEM120AQ9BXJ8 343 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 CHST11Q9NPF2 352 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 MAT2BQ9NZL9 334 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 ADAM21Q9UKJ8 722 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 PSME2Q9UL46 239 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 TRIM33Q9UPN9 1127 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 DLGAP4Q9Y2H0 992 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM215AQ9Y5M1 114 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 PHF3Q92576 2039 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 C1orf226A1L170 272 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 OR14I1A6ND48 311 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 E9PBE3 544 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 AQP7O14520 342 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 ZNF195O14628 629 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 AKAP10O43572 662 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 TRIM3O75382 744 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 CBX7O95931 251 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 SDC1P18827 310 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 NT5EP21589 574 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 GPX3P22352 226 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 STX1BP61266 288 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 KCNJ2P63252 427 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 MAP4K2Q12851 820 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 EXOSC7Q15024 291 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 PRSS53Q2L4Q9 553 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 LSM12Q3MHD2 195 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 ADCY4Q8NFM4 1077 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 GFM2Q969S9 779 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 CTHRC1Q96CG8 243 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 MAELQ96JY0 434 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 TREX2Q9BQ50 279 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 EBF4Q9BQW3 602 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 CCDC28BQ9BUN5 200 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 NXF5Q9H1B4 397 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 TP63Q9H3D4 680 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 RABEP2Q9H5N1 569 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 ZFP64Q9NPA5 681 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 MYNNQ9NPC7 610 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 CNIH4Q9P003 139 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 KLHL14Q9P2G3 628 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 BAIAP2L1Q9UHR4 511 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 RNF6Q9Y252 685 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 WBP11Q9Y2W2 641 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 NPFFR2Q9Y5X5 522 aa11.64□□□□□ -0.55
SEC61A1-206ENST00000491668 FREM3P0C091 2139 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 ANKRD33BA6NCL7 494 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 SUSD5O60279 629 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 NME6O75414 186 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 ERAL1O75616 437 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 G6PDP11413 515 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 DRD2P14416 443 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 IDO1P14902 403 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 PCSK2P16519 638 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 DDX5P17844 614 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 CSNK2A2P19784 350 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 NCF2P19878 526 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 HPCAL1P37235 193 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 RPL3P39023 403 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 DIO3P55073 304 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 NUP107P57740 925 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 TFF3Q07654 80 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms