RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 COL9A2Q14055 689 aaPredicted RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 ZNF385BQ569K4 471 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 CASP12Q6UXS9 341 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 TMIGD1Q6UXZ0 262 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 NPAS4Q8IUM7 802 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 REPS1Q96D71 796 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SCRN2Q96FV2 425 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 OTUB1Q96FW1 271 aaPredicted RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 RIOK2Q9BVS4 552 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 MND1Q9BWT6 205 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 ZNF282Q9UDV7 671 aaPredicted RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 CORO2BQ9UQ03 480 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SPIN1Q9Y657 262 aaPredicted RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 KCNMB2Q9Y691 235 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 TPRP12270 2363 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 SCN10AQ9Y5Y9 1956 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 PATJQ8NI35 1801 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 ISM1B1AKI9 464 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 IFNW1P05000 195 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 URODP06132 367 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 TPOP07202 933 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 IDSP22304 550 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SLC6A12P48065 614 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 ACY1Q03154 408 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 DOC2BQ14184 412 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SLBPQ14493 270 aaKnown RBP eCLIP9.61□□□□□ -0.87
BRD9-209ENST00000490814 COL28A1Q2UY09 1125 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 CRTC2Q53ET0 693 aaPredicted RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 TRIM40Q6P9F5 258 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 MEX3DQ86XN8 651 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 MMP21Q8N119 569 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SRFBP1Q8NEF9 429 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 OR6C4Q8NGE1 309 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 OR8J2Q8NGG1 315 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 ZNF461Q8TAF7 563 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 QRFPRQ96P65 431 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 ZNF768Q9H5H4 540 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 ANKRA2Q9H9E1 313 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SDHAF2Q9NX18 166 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 STUB1Q9UNE7 303 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 CACNA1GO43497 2377 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SIGLEC6O43699 453 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 TGM6O95932 706 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 CPN2P22792 545 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 CSTF1Q05048 431 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 FGL2Q14314 439 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SNAPC1Q16533 368 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 SLC5A12Q1EHB4 618 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 IQCF1Q8N6M8 205 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 C2orf15Q8WU43 125 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 SORCS1Q8WY21 1168 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 MRPS31Q92665 395 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 NEIL2Q969S2 332 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 RAB7BQ96AH8 199 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 OTULINQ96BN8 352 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 PAPOLGQ9BWT3 736 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 NIT2Q9NQR4 276 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 TVP23BQ9NYZ1 205 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 C5AR2Q9P296 337 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 ING4Q9UNL4 249 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 YARS2Q9Y2Z4 477 aaKnown RBP9.61□□□□□ -0.87
BRD9-209ENST00000490814 INSL6Q9Y581 213 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 OR51B4Q9Y5P0 310 aa9.61□□□□□ -0.87
BRD9-209ENST00000490814 INMT-MINDY4F8WBC2 141 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 CASKO14936 926 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 LRRTM2O43300 516 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 SOCS5O75159 536 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 CSO75390 466 aaKnown RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 GASTP01350 101 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 BCHEP06276 602 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 APEHP13798 732 aaKnown RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 PDHA2P29803 388 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 PCGF2P35227 344 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 CSNK1DP48730 415 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 SPINT3P49223 89 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 CDKL4Q5MAI5 379 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 MED27Q6P2C8 311 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 ASB18Q6ZVZ8 466 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 RHOUQ7L0Q8 258 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 SLC16A13Q7RTY0 426 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 TRMT11Q7Z4G4 463 aaKnown RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 TRAPPC5Q8IUR0 188 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 TCEANCQ8N8B7 351 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 SYT14Q8NB59 555 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 SMAD5Q99717 465 aaKnown RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 ACTR6Q9GZN1 396 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 NMNAT1Q9HAN9 279 aaPredicted RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 ZNF334Q9HCZ1 680 aaPredicted RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 STOX2Q9P2F5 926 aaPredicted RBP9.6□□□□□ -0.87
BRD9-209ENST00000490814 MGAT4AQ9UM21 535 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 CCDC88CQ9P219 2028 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 A0A1W2PPL8 197 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 ARGFXA6NJG6 315 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 CHURC1-FNTBB4DL54 471 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 NEDD8-MDP1E9PL57 170 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 ZNF670-ZNF695F2Z2N8 137 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 TLR4O00206 839 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 HRO43593 1189 aa9.6□□□□□ -0.87
BRD9-209ENST00000490814 ORC5O43913 435 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms