RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PORP16435 677 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 BGNP21810 368 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 SERPINB5P36952 375 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 MDH1P40925 334 aaKnown RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 MASP1P48740 699 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 ALDH9A1P49189 494 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 XKP51811 444 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 NR0B1P51843 470 aaKnown RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 DCAF7P61962 342 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 TRA2BP62995 288 aaKnown RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 FUT7Q11130 342 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 SNTA1Q13424 505 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 SPIN4Q56A73 249 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 PRAMEF20Q5VT98 475 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 HHATQ5VTY9 493 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 GALNT18Q6P9A2 607 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 ARSKQ6UWY0 536 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 WDR53Q7Z5U6 358 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 KIF18BQ86Y91 864 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 DDIASQ8IXT1 998 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 ULK2Q8IYT8 1036 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 SAMD14Q8IZD0 417 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 RPRMLQ8N4K4 120 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 CHDHQ8NE62 594 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 OR10G3Q8NGC4 313 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 OR2T11Q8NH01 316 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 JSRP1Q96MG2 331 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 FAIM2Q9BWQ8 316 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 YY1AP1Q9H869 796 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 SIRT5Q9NXA8 310 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 Q9UFV3 132 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 CNOT11Q9UKZ1 510 aaKnown RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 DLGAP4Q9Y2H0 992 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 POLR3HQ9Y535 204 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 LIPGQ9Y5X9 500 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 MTORP42345 2549 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 C15orf38-AP3S2A0A0A6YYH1 394 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 SYT5O00445 386 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 PIP5K1BO14986 540 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ACOX3O15254 700 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 RGS14O43566 566 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 TRIM3O75382 744 aaPredicted RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 ERAL1O75616 437 aaKnown RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 BCAS2O75934 225 aaPredicted RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 HSPA4LO95757 839 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 CHEK2O96017 543 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 SERPINE1P05121 402 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 CPMP14384 443 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 TIA1P31483 386 aaKnown RBP eCLIP9.49□□□□□ -0.89
TTC28-207ENST00000490475 LSP1P33241 339 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 FEN1P39748 380 aaKnown RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 KIR2DL3P43628 341 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 SLC1A6P48664 564 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ASCL1P50553 236 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 KRTAP10-9P60411 292 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ABCE1P61221 599 aaKnown RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 EEF1A1P68104 462 aaKnown RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 RCAN2Q14206 197 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 KIAA0040Q15053 153 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 PRSS53Q2L4Q9 553 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 FBXL19-AS1Q494R0 122 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 RFTN2Q52LD8 501 aaPredicted RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 TTMPQ5BVD1 217 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 NHSL2Q5HYW2 709 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 EEF1A1P5Q5VTE0 462 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 RTL6Q6ICC9 239 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 NOXRED1Q6NXP6 359 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 SLC48A1Q6P1K1 146 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 VWA5B2Q8N398 1253 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ZNF441Q8N8Z8 693 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 SPPL2AQ8TCT8 520 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 FAM222BQ8WU58 562 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 TWIST2Q8WVJ9 160 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ERP27Q96DN0 273 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 TMEM41AQ96HV5 264 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 C3orf30Q96M34 536 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ZFP3Q96NJ6 502 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ANGPTL4Q9BY76 406 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 OR10A5Q9H207 317 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 LRTM1Q9HBL6 345 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 PRODH2Q9UF12 536 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 GIMAP2Q9UG22 337 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 L3MBTL1Q9Y468 752 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 ABCA4P78363 2273 aa9.49□□□□□ -0.89
TTC28-207ENST00000490475 SETD2Q9BYW2 2564 aaPredicted RBP9.49□□□□□ -0.89
TTC28-207ENST00000490475 LRRC3CA6NJW4 275 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 ABCB7O75027 752 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 PEX11AO75192 247 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 TRAPPC6AO75865 159 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 RSL1D1O76021 490 aaKnown RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 ACTL6AO96019 429 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 ATP1B1P05026 303 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 HPNP05981 417 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 CELA3AP09093 270 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 CT62P0C5K7 136 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 RFPL3SP0C7P2 107 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 DRD2P14416 443 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms