RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FGF4P08620 206 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 MAPK1P28482 360 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 GPC1P35052 558 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 CORO7P57737 925 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 GALNTL6Q49A17 601 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 SH2D4BQ5SQS7 431 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 CCDC71Q8IV32 467 aaPredicted RBP15.95■□□□□ 0.14
SEC13-218ENST00000490283 MREGQ8N565 214 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 GFM2Q969S9 779 aaKnown RBP15.95■□□□□ 0.14
SEC13-218ENST00000490283 PPCDCQ96CD2 204 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 SLC35A4Q96G79 324 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 AMDHD1Q96NU7 426 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 SPOCK3Q9BQ16 436 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 TMEM109Q9BVC6 243 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 PARD6BQ9BYG5 372 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 UBQLN3Q9H347 655 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 GLIPR2Q9H4G4 154 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 MRTO4Q9UKD2 239 aaKnown RBP15.95■□□□□ 0.14
SEC13-218ENST00000490283 C19orf53Q9UNZ5 99 aaPredicted RBP15.95■□□□□ 0.14
SEC13-218ENST00000490283 MAPRE3Q9UPY8 281 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 FAM215AQ9Y5M1 114 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 DNAJC15Q9Y5T4 150 aa15.95■□□□□ 0.14
SEC13-218ENST00000490283 AHRRA9YTQ3 701 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 TMEM114B3SHH9 223 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 C19orf84I3L1E1 186 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 PLOD2O00469 737 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 CBR3O75828 277 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 TUBBP07437 444 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 CT45A8P0DMV1 189 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 CT45A9P0DMV2 189 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 GLI4P10075 376 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 PTPN6P29350 595 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 ASMTP46597 345 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 ZFP36L2P47974 494 aaKnown RBP15.94■□□□□ 0.14
SEC13-218ENST00000490283 PNLIPRP2P54317 469 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 KIAA0040Q15053 153 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 CT45A2Q5DJT8 189 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 FNDC7Q5VTL7 733 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 MEX3BQ6ZN04 569 aaKnown RBP15.94■□□□□ 0.14
SEC13-218ENST00000490283 ZCCHC23Q6ZST2 131 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 ULK2Q8IYT8 1036 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 AGR3Q8TD06 166 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 ZBED6CLQ96FA7 236 aaPredicted RBP15.94■□□□□ 0.14
SEC13-218ENST00000490283 ZNF764Q96H86 408 aaPredicted RBP15.94■□□□□ 0.14
SEC13-218ENST00000490283 EGLN2Q96KS0 407 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 PPP3R2Q96LZ3 170 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 TSSK3Q96PN8 268 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 REEP4Q9H6H4 257 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 GALNT9Q9HCQ5 603 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 Q9N2J8 555 aa15.94■□□□□ 0.14
SEC13-218ENST00000490283 TTC36A6NLP5 189 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 PIP5K1BO14986 540 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 LSM1O15116 133 aaKnown RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 CTIFO43310 598 aaKnown RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 AKAP10O43572 662 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 IFI6P09912 130 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 PRF1P14222 555 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 SDC1P18827 310 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 TACR1P25103 407 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 SSTR2P30874 369 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 KIR3DL1P43629 444 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 PSMD4P55036 377 aaKnown RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 CRYZQ08257 329 aaKnown RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 HSPB3Q12988 150 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 DECR1Q16698 335 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 RIPPLY2Q5TAB7 128 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 DESI1Q6ICB0 168 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 RTL6Q6ICC9 239 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 NPSR1Q6W5P4 371 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 Q6ZSR9 355 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 R3HCC1LQ7Z5L2 792 aaKnown RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 OR2L13Q8N349 312 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 FAM83FQ8NEG4 500 aaPredicted RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 OR2T11Q8NH01 316 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 OR14L1PQ8NHC6 308 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 EFHD2Q96C19 240 aaPredicted RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 ELP4Q96EB1 424 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 FCRL1Q96LA6 429 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 TUBB1Q9H4B7 451 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 C3orf14Q9HBI5 128 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 SERHLQ9NQF3 203 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 SH3BP4Q9P0V3 963 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 EXO1Q9UQ84 846 aaKnown RBP15.93■□□□□ 0.14
SEC13-218ENST00000490283 CAMK2AQ9UQM7 478 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 SLC6A5Q9Y345 797 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 WIF1Q9Y5W5 379 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 EML6Q6ZMW3 1958 aa15.93■□□□□ 0.14
SEC13-218ENST00000490283 DNAJC13O75165 2243 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 CENPEQ02224 2701 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 CACNA1DQ01668 2161 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 NKX2-6A6NCS4 301 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 C2orf72A6NCS6 295 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 HSPB2A8KAH6 182 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 ESPNB1AK53 854 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 TMEM233B4DJY2 109 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 UPK1AO00322 258 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 TSPAN2O60636 221 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 NME6O75414 186 aaPredicted RBP15.92■□□□□ 0.14
SEC13-218ENST00000490283 BPGMP07738 259 aa15.92■□□□□ 0.14
SEC13-218ENST00000490283 HPCAL1P37235 193 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms