RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DRD5P21918 477 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 DPP4P27487 766 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 SPRP35270 261 aaPredicted RBP12.59□□□□□ -0.39
VARS-227ENST00000489979 DEKP35659 375 aaKnown RBP12.59□□□□□ -0.39
VARS-227ENST00000489979 PPICP45877 212 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 EMDP50402 254 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 B3GALT5-AS1P59052 145 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 DUSP2Q05923 314 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 DMTNQ08495 405 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 GTF2H2Q13888 395 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 SLMAPQ14BN4 828 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 TRMT12Q53H54 448 aaKnown RBP12.59□□□□□ -0.39
VARS-227ENST00000489979 GRTP1Q5TC63 336 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 GTF2H2CQ6P1K8 395 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 GOLGA7Q7Z5G4 137 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 CTAGE3PQ8IX95 158 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 DTNBP1Q96EV8 351 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 CDK15Q96Q40 435 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 IPPKQ9H8X2 491 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 SAYSD1Q9NPB0 183 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 PRODH2Q9UF12 536 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 PCDHA9Q9Y5H5 950 aa12.59□□□□□ -0.39
VARS-227ENST00000489979 GOLGA6L10A6NI86 522 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 C17orf51A8MQB3 221 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 H0YC42 278 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 KLF4O43474 513 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 SOX30O94993 753 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 PLAUP00749 431 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 ATP1B1P05026 303 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 THBDP07204 575 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 CD8BP10966 210 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 PCSK2P16519 638 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 CR1P17927 2039 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
VARS-227ENST00000489979 TBXA2RP21731 343 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 GRK2P25098 689 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 CRABP2P29373 138 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 TPD52P55327 224 aaPredicted RBP12.58□□□□□ -0.4
VARS-227ENST00000489979 CLDN15P56746 228 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 LTB4RQ15722 352 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 BEX5Q5H9J7 111 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 CCNYL2Q5T2Q4 361 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 SLC48A1Q6P1K1 146 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 ZNF704Q6ZNC4 412 aaPredicted RBP12.58□□□□□ -0.4
VARS-227ENST00000489979 OR4K17Q8NGC6 315 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 SLC35A4Q96G79 324 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 ADOQ96SZ5 270 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 PINK1Q9BXM7 581 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 MRPL1Q9BYD6 325 aaKnown RBP12.58□□□□□ -0.4
VARS-227ENST00000489979 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 AHSPQ9NZD4 102 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 ADAM29Q9UKF5 820 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 PROCRQ9UNN8 238 aa12.58□□□□□ -0.4
VARS-227ENST00000489979 GPR55Q9Y2T6 319 aaPredicted RBP12.58□□□□□ -0.4
VARS-227ENST00000489979 C1orf226A1L170 272 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 ABCB7O75027 752 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 NME6O75414 186 aaPredicted RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 SIX3O95343 332 aaPredicted RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 CLDN9O95484 217 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 ARL1P40616 181 aaPredicted RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 SUCLG1P53597 346 aaKnown RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 MAPK12P53778 367 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 GAS1P54826 345 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 ALDH18A1P54886 795 aaKnown RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 DSCR4P56555 118 aaPredicted RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 MRPS35P82673 323 aaKnown RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 IRF9Q00978 393 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 FGFBP1Q14512 234 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 EXOC3L2Q2M3D2 409 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 FAM180BQ6P0A1 224 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 C3orf62Q6ZUJ4 267 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 SH2D5Q6ZV89 423 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 CYS1Q717R9 158 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 PAGE2Q7Z2X7 111 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 CENPLQ8N0S6 344 aaPredicted RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 PPM1NQ8N819 430 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 GBP7Q8N8V2 638 aaPredicted RBP12.57□□□□□ -0.4
VARS-227ENST00000489979 RHEBL1Q8TAI7 183 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 FNDC9Q8TBE3 224 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 LRRC1Q9BTT6 524 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 RNF122Q9H9V4 155 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 ACOT9Q9Y305 439 aa12.57□□□□□ -0.4
VARS-227ENST00000489979 A0A087X1B8 175 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 OR7A17O14581 309 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 HS3ST1O14792 307 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 SEC14L5O43304 696 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 TSPAN2O60636 221 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 TMCC2O75069 709 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 TNFRSF21O75509 655 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 CT45A8P0DMV1 189 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 CT45A9P0DMV2 189 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 TCP1P17987 556 aaKnown RBP12.56□□□□□ -0.4
VARS-227ENST00000489979 CORO7P57737 925 aa12.56□□□□□ -0.4
VARS-227ENST00000489979 EEFSECP57772 596 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms