RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STK17BO94768 372 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 GHRP10912 638 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 CD1EP15812 388 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 ZNF18P17022 549 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 RFC2P35250 354 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 SRP54P61011 504 aaKnown RBP3.53□□□□□ -1.84
CCDC39-206ENST00000489868 PRKCEQ02156 737 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 GFPT1Q06210 699 aaPredicted RBP3.53□□□□□ -1.84
CCDC39-206ENST00000489868 PPP1R8Q12972 351 aaKnown RBP3.53□□□□□ -1.84
CCDC39-206ENST00000489868 SBK1Q52WX2 424 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 CWC27Q6UX04 472 aaKnown RBP3.53□□□□□ -1.84
CCDC39-206ENST00000489868 COLGALT1Q8NBJ5 622 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 TMEM185AQ8NFB2 350 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 CCDC51Q96ER9 411 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 LINC00167Q96N53 147 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 CBWD1Q9BRT8 395 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 SIRPDQ9H106 197 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 FAM170AA1A519 330 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 NOL4O94818 638 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 CASP9P55211 416 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 RIPPLY3P57055 190 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 IL18R1Q13478 541 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 DCAF4L1Q3SXM0 396 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 GLYR1Q49A26 553 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-206ENST00000489868 LGSNQ5TDP6 509 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 PNCKQ6P2M8 343 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 ADAMTSL2Q86TH1 951 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 PEX5LQ8IYB4 626 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 PSMA8Q8TAA3 256 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 FAM122AQ96E09 287 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 TECTBQ96PL2 329 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 DPH7Q9BTV6 452 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 C19orf24Q9BVV8 132 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 ELOVL4Q9GZR5 314 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 FAM124BQ9H5Z6 455 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-206ENST00000489868 ISG20L2Q9H9L3 353 aaKnown RBP3.52□□□□□ -1.85
CCDC39-206ENST00000489868 FAM114A2Q9NRY5 505 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 DPM3Q9P2X0 92 aa3.52□□□□□ -1.85
CCDC39-206ENST00000489868 APOBEC3BQ9UH17 382 aaKnown RBP3.52□□□□□ -1.85
CCDC39-206ENST00000489868 NOL7Q9UMY1 257 aaKnown RBP3.52□□□□□ -1.85
CCDC39-206ENST00000489868 B4DXG7 233 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 ADAM12O43184 909 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 BUB1O43683 1085 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 OLFM2O95897 454 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 HSPB1P04792 205 aaKnown RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 GNSP15586 552 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 PTBP1P26599 531 aaKnown RBP eCLIP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 TMOD1P28289 359 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 ACVR1BP36896 505 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 EFNA3P52797 238 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 METAP1P53582 386 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 BNIP1Q12981 228 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 EIF2B1Q14232 305 aaKnown RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 CAPRIN1Q14444 709 aaKnown RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 ZSWIM7Q19AV6 140 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 AGKQ53H12 422 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 HERC4Q5GLZ8 1057 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 ZNF57Q68EA5 555 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 UFSP1Q6NVU6 142 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 C1orf186Q6ZWK4 172 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 ERICH1Q86X53 443 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 UNC45BQ8IWX7 931 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 C9orf40Q8IXQ3 194 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 LRRC17Q8N6Y2 441 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 ADAMTS16Q8TE57 1224 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 PHYHIPQ92561 330 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 FRAT1Q92837 279 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 TEX13AQ9BXU3 409 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 APPL1Q9UKG1 709 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 BARX2Q9UMQ3 279 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 TDRKHQ9Y2W6 561 aaKnown RBP3.51□□□□□ -1.85
CCDC39-206ENST00000489868 METP08581 1390 aa3.51□□□□□ -1.85
CCDC39-206ENST00000489868 A0A0U1RQG5 324 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 FAM231BA6NCW3 169 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 PANO1I0J062 215 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 IMPA2O14732 288 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 GSTA1P08263 222 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 CPN1P15169 458 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 STK19P49842 368 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 GPC3P51654 580 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 CKAP4Q07065 602 aaKnown RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 BTG3Q14201 252 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 ACSF3Q4G176 576 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 ZNF658Q5TYW1 1059 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 HACD2Q6Y1H2 254 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 CCDC36Q8IYA8 594 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 OR52E1Q8NGJ3 308 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 SLC25A38Q96DW6 304 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 MAGEB18Q96M61 343 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 NAP1L3Q99457 506 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-206ENST00000489868 NDUFAF3Q9BU61 184 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 HMG20BQ9P0W2 317 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 CCPG1Q9ULG6 757 aa3.5□□□□□ -1.85
CCDC39-206ENST00000489868 PROS1P07225 676 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 SDC1P18827 310 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 NT5C2P49902 561 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 PUDPQ08623 228 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms