RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FAM109BQ6ICB4 259 aaPredicted RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 KLC3Q6P597 504 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SCARA5Q6ZMJ2 495 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SMIM5Q71RC9 77 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 MON1BQ7L1V2 547 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PHLDB2Q86SQ0 1253 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PARGQ86W56 976 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CD302Q8IX05 232 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF683Q8IZ20 524 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 LGI2Q8N0V4 545 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CPSF7Q8N684 471 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF397Q8NF99 534 aaPredicted RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 GRHL3Q8TE85 626 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 IRGQQ8WZA9 623 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 TM4SF19Q96DZ7 209 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 COQ2Q96H96 371 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PLEKHF1Q96S99 279 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PAIP2Q9BPZ3 127 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 KXD1Q9BQD3 176 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 BBS2Q9BXC9 721 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PINK1Q9BXM7 581 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 OR2AG1Q9H205 316 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 IL25Q9H293 177 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 ACTL8Q9H568 366 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 TLE6Q9H808 572 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 DDX31Q9H8H2 851 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 IL1RL2Q9HB29 575 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 LRRC4Q9HBW1 653 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 NEK6Q9HC98 313 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 MRPL47Q9HD33 250 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 EXOC1Q9NV70 894 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 MIS18AQ9NYP9 233 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 OR6C2Q9NZP2 312 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 LHX3Q9UBR4 397 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SEC14L3Q9UDX4 400 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 MIOXQ9UGB7 285 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 EMCNQ9ULC0 261 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 DIMT1Q9UNQ2 313 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 OR1A2Q9Y585 309 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SRPRBQ9Y5M8 271 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 ETV7Q9Y603 341 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 DDX49Q9Y6V7 483 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SBF2Q86WG5 1849 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 WNK3Q9BYP7 1800 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 BCL9O00512 1426 aa2.84□□□□□ -1.96
DEPDC1-204ENST00000489862 KDM6AO15550 1401 aaPredicted RBP2.84□□□□□ -1.96
DEPDC1-204ENST00000489862 IGLV5-52A0A0A0MRZ9 124 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TRAV25A0A0B4J276 109 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ATP6AP2A0A1C7CYW4 349 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 MTMR11A4FU01 709 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF732B4DXR9 585 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TCP11X1B4DZS4 312 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 NPIPA3F8WFD2 350 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 GAPDHSO14556 408 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 WNT9BO14905 357 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TIMM8AO60220 97 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 GPR137BO60478 399 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 CSF2P04141 144 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 MMP3P08254 477 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 LCN1P31025 176 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 NUP62P37198 522 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 NPY2RP49146 381 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 VAMP7P51809 220 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ISL1P61371 349 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 BTG1P62324 171 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 RPL23AP62750 156 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 RPP38P78345 283 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 DHX34Q14147 1143 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 RBBP5Q15291 538 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 DUOXA1Q1HG43 343 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF699Q32M78 642 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ITPRIPL2Q3MIP1 535 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF718Q3SXZ3 478 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 GPR33Q49SQ1 333 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 HSP90AA4PQ58FG1 418 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF311Q5JNZ3 666 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 SPANXN2Q5MJ10 180 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ELFN2Q5R3F8 820 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 PDSS1Q5T2R2 415 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 LYPLAL1Q5VWZ2 237 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 SEL1L3Q68CR1 1132 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 C11orf63Q6NUN7 778 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 KCTD18Q6PI47 426 aaPredicted RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 DPY19L4Q7Z388 723 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 C16orf62Q7Z3J2 963 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 DHDDSQ86SQ9 333 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 MAP7D3Q8IWC1 876 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 FGFRL1Q8N441 504 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 SDR9C7Q8NEX9 313 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 NANPQ8TBE9 248 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 RAET1EQ8TD07 263 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 HCAR2Q8TDS4 363 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TOP1MTQ969P6 601 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 LRRC39Q96DD0 335 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 NRBF2Q96F24 287 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 C12orf42Q96LP6 360 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 MTMR9Q96QG7 549 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 AGPAT1Q99943 283 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 GAL3ST1Q99999 423 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 GSDMCQ9BYG8 508 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms