RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 OR1I1O60431 355 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MSCO60682 206 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PRAMEF2O60811 474 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ENTPD6O75354 484 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OAZ2O95190 189 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 KCNK5O95279 499 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SOD1P00441 154 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 URODP06132 367 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CBSLP0DN79 551 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MYCLP12524 364 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HOXB9P17482 250 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GPX2P18283 190 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LAG3P18627 525 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ELK1P19419 428 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NPR2P20594 1047 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GIFP27352 417 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PTPN6P29350 595 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GABRA5P31644 462 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 S100A3P33764 101 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CNR2P34972 360 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CBSP35520 551 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC1A3P43003 542 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PITPNBP48739 271 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SULT1E1P49888 294 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CRISP1P54107 249 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CLDN8P56748 225 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TPI1P60174 286 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 KCNJ10P78508 379 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NRG1Q02297 640 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ACY1Q03154 408 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CRHR2Q13324 411 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 VEZF1Q14119 521 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HABP2Q14520 560 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM132BQ14DG7 1078 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 UAP1L1Q3KQV9 507 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC36A2Q495M3 483 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ACER2Q5QJU3 275 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 C10orf91Q5T1B1 145 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC22A10Q63ZE4 541 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF660Q6AZW8 331 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM88Q6PEY1 159 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 DOK6Q6PKX4 331 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RNF165Q6ZSG1 346 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 C8orf86Q6ZUL3 223 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MOB3CQ70IA8 216 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MAMDC2Q7Z304 686 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM122BQ7Z309 247 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LHFPL3Q86UP9 236 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NAA40Q86UY6 237 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PIM3Q86V86 326 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LRRC28Q86X40 367 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 DMRTC2Q8IXT2 367 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GPR65Q8IYL9 337 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PUSL1Q8N0Z8 303 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 DEFB106AQ8N104 65 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 C10orf111Q8N326 155 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 IL22RA1Q8N6P7 574 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MDGA1Q8NFP4 955 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR4C15Q8NGM1 316 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR5M3Q8NGP4 307 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR6K3Q8NGY3 331 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SPATA22Q8NHS9 363 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 THAP6Q8TBB0 222 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RXFP4Q8TDU9 374 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TCTEX1D2Q8WW35 142 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM203Q969S6 136 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HPDLQ96IR7 371 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR4K3Q96R72 315 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TCF25Q9BQ70 676 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 POLR1EQ9GZS1 481 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMPRSS5Q9H3S3 457 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PIGMQ9H3S5 423 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ELAC1Q9H777 363 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RNF122Q9H9V4 155 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RPF1Q9H9Y2 349 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 FBRSQ9HAH7 460 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SERHLQ9NQF3 203 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC6A13Q9NSD5 602 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM184CQ9NVA4 438 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PIPOXQ9P0Z9 390 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PPP4R1LQ9P1A2 415 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF624Q9P2J8 865 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ASH2LQ9UBL3 628 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RPS6KB2Q9UBS0 482 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GHRLQ9UBU3 117 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 FEM1BQ9UK73 627 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ACSL6Q9UKU0 697 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 UBQLN1Q9UMX0 589 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NEU3Q9UQ49 428 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HIF3AQ9Y2N7 669 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CCL27Q9Y4X3 112 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SPIN1Q9Y657 262 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 COL11A2P13942 1736 aaPredicted RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 TRIP11Q15643 1979 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 RFXAPO00287 272 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF593O00488 134 aaPredicted RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 EEF1E1O43324 174 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 KRT33AO76009 404 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SIX6O95475 246 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 HPXP02790 462 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms