RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLC35C2Q9NQQ7 365 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 SIRT3Q9NTG7 399 aaPredicted RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 FAM120CQ9NX05 1096 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 TAS2R1Q9NYW7 299 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 SH3BP4Q9P0V3 963 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 MYOTQ9UBF9 498 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 COPS7AQ9UBW8 275 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 UTS2RQ9UKP6 389 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 NUP214P35658 2090 aaPredicted RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 MYOCOSA0A1B0GUC4 107 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 A1L4Q6 167 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 CCDC154A6NI56 674 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 KLRC4-KLRK1H3BQV0 150 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 RNASET2O00584 256 aaKnown RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 CFLARO15519 480 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 PDPK1O15530 556 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ATP6V1G2O95670 118 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 GPR75O95800 540 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF24P17028 368 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 S100A3P33764 101 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 PTGER1P34995 402 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 CASP6P55212 293 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 PLIN5Q00G26 463 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 MGAT2Q10469 447 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 MLC1Q15049 377 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 GTDC1Q4AE62 458 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 LRIF1Q5T3J3 769 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 C1QL3Q5VWW1 255 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 MTFR2Q6P444 385 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 NET1Q7Z628 596 aaPredicted RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 FJX1Q86VR8 437 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ANKRD46Q86W74 232 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 OR5L2Q8NGL0 311 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 PSMA8Q8TAA3 256 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC2A12Q8TD20 617 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 STMN2Q93045 179 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 RBM18Q96H35 190 aaKnown RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 MAGED4Q96JG8 741 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ART5Q96L15 291 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 AMDHD1Q96NU7 426 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ANKRD27Q96NW4 1050 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 OR52E6Q96RD3 313 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ZBTB18Q99592 522 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 PELOQ9BRX2 385 aaKnown RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 OR8D2Q9GZM6 311 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 WDR41Q9HAD4 459 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 EFCAB1Q9HAE3 211 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 TIMMDC1Q9NPL8 285 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC25A37Q9NYZ2 338 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 SUCOQ9UBS9 1254 aaKnown RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 BTNL2Q9UIR0 455 aa9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 PRPF19Q9UMS4 504 aaKnown RBP9.76□□□□□ -0.85
SCAMP4-208ENST00000489554 ICE1Q9Y2F5 2266 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 TRGV8A0A0C4DH27 118 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 PRSS51A0A1B0GVH4 220 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 TMEM200CA6NKL6 621 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 BBIP1A8MTZ0 92 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 A8MVJ9 347 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 NPIPA5E9PKD4 350 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 MRASO14807 208 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 PRKNO60260 465 aaPredicted RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC19A2O60779 497 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 ERAL1O75616 437 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 OR2J2O76002 312 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 CLDN1O95832 211 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 C6orf47O95873 294 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 CPMP14384 443 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 FEN1P39748 380 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 CA7P43166 264 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 CDK9P50750 372 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 XKP51811 444 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 HBA1P69905 142 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 RNF4P78317 190 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 GAB1Q13480 694 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 LTB4RQ15722 352 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 TRMT5Q32P41 509 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 BNC2Q6ZN30 1099 aaPredicted RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 RINLQ6ZS11 566 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF551Q7Z340 670 aaPredicted RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 SIAH3Q8IW03 269 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 ST13P4Q8IZP2 240 aaPredicted RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 GHDCQ8N2G8 530 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 SIMC1Q8NDZ2 872 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 OR4K14Q8NGD5 310 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF721Q8TF20 911 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 ASB15Q8WXK1 588 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 PHF12Q96QT6 1004 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 PRPF18Q99633 342 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 GPATCH1Q9BRR8 931 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 CADM1Q9BY67 442 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 CXorf36Q9H7Y0 433 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 DCLRE1BQ9H816 532 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 ATAD3AQ9NVI7 634 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 HPF1Q9NWY4 346 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 LEF1Q9UJU2 399 aaPredicted RBP9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 NPIPA1Q9UND3 350 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 NDUFAF1Q9Y375 327 aa9.75□□□□□ -0.85
SCAMP4-208ENST00000489554 SVILO95425 2214 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 435.9 ms