RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 EMC8O43402 210 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 SASH3O75995 380 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 CDK9P50750 372 aaKnown RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 PPP2R2AP63151 447 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 SNTA1Q13424 505 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 EFR3AQ14156 821 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 SLC10A1Q14973 349 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 NPSR1Q6W5P4 371 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 Q6ZPB1 254 aaPredicted RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 SPATA19Q7Z5L4 167 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 CAMKMTQ7Z624 323 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 NUP43Q8NFH3 380 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 PIWIL2Q8TC59 973 aaKnown RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 LRRC8CQ8TDW0 803 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 SSC4DQ8WTU2 575 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 SLC35A4Q96G79 324 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 RILPQ96NA2 401 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 LMF2Q9BU23 707 aaKnown RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 DPY30Q9C005 99 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 METTL7AQ9H8H3 244 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 Q9N2J8 555 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 PLSCR2Q9NRY7 297 aa15.92■□□□□ 0.14
MDC1-206ENST00000489540 MARCOQ9UEW3 520 aaPredicted RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 MRTO4Q9UKD2 239 aaKnown RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 TRGV8A0A0C4DH27 118 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 SDHDO14521 159 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 CDC40O60508 579 aaKnown RBP eCLIP15.91■□□□□ 0.14
MDC1-206ENST00000489540 UGT2B11O75310 529 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 TRIM3O75382 744 aaPredicted RBP15.91■□□□□ 0.14
MDC1-206ENST00000489540 CA7P43166 264 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 PNLIPRP2P54317 469 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 PRKAG1P54619 331 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 PER3P56645 1201 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 PRR5P85299 388 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 VPS26BQ4G0F5 336 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 SLC30A6Q6NXT4 461 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 ARHGAP11AQ6P4F7 1023 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 DYDC1Q8WWB3 177 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 JSRP1Q96MG2 331 aaPredicted RBP15.91■□□□□ 0.14
MDC1-206ENST00000489540 C7orf26Q96N11 449 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 ADOQ96SZ5 270 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 DUSP26Q9BV47 211 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 INTS9Q9NV88 658 aaKnown RBP15.91■□□□□ 0.14
MDC1-206ENST00000489540 QPCTLQ9NXS2 382 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 B4GALT7Q9UBV7 327 aa15.91■□□□□ 0.14
MDC1-206ENST00000489540 SVILO95425 2214 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 A0A1B0GTH9 108 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 WIPF3A6NGB9 483 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 TSPAN2O60636 221 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 PDE9AO76083 593 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 ABOP16442 354 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 EPHA3P29320 983 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 IL12BP29460 328 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 PTGS2P35354 604 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 MAGEA5P43359 124 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 HSF1Q00613 529 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 GAB1Q13480 694 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 DECR1Q16698 335 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 PGS1Q32NB8 556 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 C1QL3Q5VWW1 255 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 ZCCHC12Q6PEW1 402 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 CDRT4Q8N9R6 151 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 PSMA8Q8TAA3 256 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 NTNG2Q96CW9 530 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 TMEM41AQ96HV5 264 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 ZNF597Q96LX8 424 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 MS4A4EQ96PG1 132 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 NODALQ96S42 347 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 WDR55Q9H6Y2 383 aaPredicted RBP15.9■□□□□ 0.14
MDC1-206ENST00000489540 CBLCQ9ULV8 474 aa15.9■□□□□ 0.14
MDC1-206ENST00000489540 TENM4Q6N022 2769 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 CROCCQ5TZA2 2017 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 LRRC3CA6NJW4 275 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 PRRG2O14669 202 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 ICOSLGO75144 302 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 IGHG3P01860 377 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 EFNA1P20827 205 aaPredicted RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 GABRA3P34903 492 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 MASP1P48740 699 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 PSMD4P55036 377 aaKnown RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 BICRALQ6AI39 1079 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 SZRD1Q7Z422 152 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 CHERPQ8IWX8 916 aaKnown RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 VPS37AQ8NEZ2 397 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 OR4N2Q8NGD1 307 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 OR8J2Q8NGG1 315 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 NUDT8Q8WV74 236 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 HOXB13Q92826 284 aaPredicted RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 TESCQ96BS2 214 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 MAELQ96JY0 434 aaKnown RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 NEUROD4Q9HD90 331 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 ACKR4Q9NPB9 350 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 EQTNQ9NQ60 294 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 SIRT3Q9NTG7 399 aaPredicted RBP15.89■□□□□ 0.13
MDC1-206ENST00000489540 SNX8Q9Y5X2 465 aa15.89■□□□□ 0.13
MDC1-206ENST00000489540 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 GOLGA8QA0A0J9YX86 632 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 A0A1B0GVC2 190 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 GOLGA8OA6NCC3 632 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms