RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 SYVN1Q86TM6 617 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 KIR2DL5AQ8N109 375 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 MARCH1Q8TCQ1 289 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 DEPDC1BQ8WUY9 529 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 MR1Q95460 341 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 EDEM3Q9BZQ6 932 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 VCXQ9H320 206 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 TMEM206Q9H813 350 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 DAZ3Q9NR90 486 aaKnown RBP1.88□□□□□ -2.11
CBWD1-216ENST00000489272 DNAJC17Q9NVM6 304 aaKnown RBP1.88□□□□□ -2.11
CBWD1-216ENST00000489272 NECAP2Q9NVZ3 263 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 SEPT10Q9P0V9 454 aa1.88□□□□□ -2.11
CBWD1-216ENST00000489272 TRMT6Q9UJA5 497 aaKnown RBP1.88□□□□□ -2.11
CBWD1-216ENST00000489272 LEF1Q9UJU2 399 aaPredicted RBP1.88□□□□□ -2.11
CBWD1-216ENST00000489272 BARX2Q9UMQ3 279 aaPredicted RBP1.88□□□□□ -2.11
CBWD1-216ENST00000489272 FCGBPQ9Y6R7 5405 aaPredicted RBP1.87□□□□□ -2.11
CBWD1-216ENST00000489272 TRBV7-9A0A0J9YWB2 115 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 ANKRD63C9JTQ0 380 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 TTI1O43156 1089 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 ZNF254O75437 659 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 REC8O95072 547 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 SEMG1P04279 462 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 SDC1P18827 310 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 HOXD10P28358 340 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 ACADSBP45954 432 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 OC90Q02509 493 aaPredicted RBP1.87□□□□□ -2.11
CBWD1-216ENST00000489272 BNIP1Q12981 228 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 EXOSC7Q15024 291 aaKnown RBP1.87□□□□□ -2.11
CBWD1-216ENST00000489272 STXBP2Q15833 593 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 CAMK4Q16566 473 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 PRR5LQ6MZQ0 368 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 CCDC83Q8IWF9 413 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 TUSC5Q8IXB3 177 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 PYROXD2Q8N2H3 581 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 NEIL2Q969S2 332 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 MRPL53Q96EL3 112 aaKnown RBP1.87□□□□□ -2.11
CBWD1-216ENST00000489272 C11orf24Q96F05 449 aaPredicted RBP1.87□□□□□ -2.11
CBWD1-216ENST00000489272 CCDC114Q96M63 670 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 NRTNQ99748 197 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 VPS54Q9P1Q0 977 aa1.87□□□□□ -2.11
CBWD1-216ENST00000489272 IGLV4-60A0A075B6I1 120 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 TRBV6-6A0A0A6YYG2 114 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 CFLARO15519 480 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 TBL1XO60907 577 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 BBOX1O75936 387 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ECDO95905 644 aaPredicted RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 PDE7AQ13946 482 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 EIF2B1Q14232 305 aaKnown RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ZNF630Q2M218 657 aaPredicted RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ZNF789Q5FWF6 425 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 SHQ1Q6PI26 577 aaKnown RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 LRRC31Q6UY01 552 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ALLCQ8N6M5 410 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 SIDT2Q8NBJ9 832 aaKnown RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 DCUN1D4Q92564 292 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 TEKT1Q969V4 418 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 DNAJA3Q96EY1 480 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 CITED2Q99967 270 aaPredicted RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 THUMPD3Q9BV44 507 aaKnown RBP1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ABCG8Q9H221 673 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 RNPEPL1Q9HAU8 725 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 ACOXLQ9NUZ1 547 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 MARCH5Q9NX47 278 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 CACNG2Q9Y698 323 aa1.86□□□□□ -2.11
CBWD1-216ENST00000489272 A0A0J9YVX5 310 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 USP27XA6NNY8 438 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 PDLIM1O00151 329 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 ICOSLGO75144 302 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 TBCAO75347 108 aaKnown RBP1.85□□□□□ -2.11
CBWD1-216ENST00000489272 GMNNO75496 209 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 TIMP1P01033 207 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 ZNF823P16415 610 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 MAT2AP31153 395 aaKnown RBP1.85□□□□□ -2.11
CBWD1-216ENST00000489272 ST8SIA6P61647 398 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 CCDC158Q5M9N0 1113 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 HOOK3Q86VS8 718 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 PPP1R27Q86WC6 154 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 ZNF100Q8IYN0 542 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 CLYBLQ8N0X4 340 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 C18orf25Q96B23 403 aaPredicted RBP1.85□□□□□ -2.11
CBWD1-216ENST00000489272 TMEM101Q96IK0 257 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 DDX50Q9BQ39 737 aaKnown RBP1.85□□□□□ -2.11
CBWD1-216ENST00000489272 APOOQ9BUR5 198 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 DCLRE1BQ9H816 532 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 ELOVL2Q9NXB9 296 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 ERVK-18Q9QC07 812 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 SWAP70Q9UH65 585 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 SMC3Q9UQE7 1217 aa1.85□□□□□ -2.11
CBWD1-216ENST00000489272 MTCL1Q9Y4B5 1905 aaKnown RBP1.85□□□□□ -2.11
CBWD1-216ENST00000489272 DHRS7CA6NNS2 312 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 SERPINE3A8MV23 424 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 SFTPBP07988 381 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 GSTA1P08263 222 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 SERPINF2P08697 491 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 STSP08842 583 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 HERV-K104P63124 156 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 OTUD4Q01804 1114 aaKnown RBP1.84□□□□□ -2.11
CBWD1-216ENST00000489272 PAX5Q02548 391 aa1.84□□□□□ -2.11
CBWD1-216ENST00000489272 UBXN1Q04323 297 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms