RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GPRIN2O60269 458 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 ADAM11O75078 769 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 GRK2P25098 689 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 PPICP45877 212 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 EEFSECP57772 596 aaKnown RBP14.53□□□□□ -0.08
USP48-210ENST00000489108 PHEXP78562 749 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 PON3Q15166 354 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 CPSF6Q16630 551 aaKnown RBP eCLIP14.53□□□□□ -0.08
USP48-210ENST00000489108 LIPJQ5W064 366 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 DNM1P46Q6ZS02 220 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 FAM214BQ7L5A3 538 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 GTPBP3Q969Y2 492 aaKnown RBP14.53□□□□□ -0.08
USP48-210ENST00000489108 DTNBP1Q96EV8 351 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 ADOQ96SZ5 270 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 PLSCR4Q9NRQ2 329 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 NSMCE4AQ9NXX6 385 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 NUDT4Q9NZJ9 180 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 LIPT1Q9Y234 373 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.53□□□□□ -0.087e-10■■■□□ 18.7
USP48-210ENST00000489108 ALPK2Q86TB3 2170 aa14.52□□□□□ -0.08
USP48-210ENST00000489108 SUPT3HB4E1H0 165 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 H0YIV9 168 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 UBXN8O00124 270 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 TO15178 435 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 NDUFS7O75251 213 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 SUPT3HO75486 399 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 CBX7O95931 251 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 IGHV4-39P01824 125 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 DANCRP0C864 163 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 STMN1P16949 149 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 FEN1P39748 380 aaKnown RBP14.52□□□□□ -0.09
USP48-210ENST00000489108 EMDP50402 254 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 GAS1P54826 345 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 DSCR4P56555 118 aaPredicted RBP14.52□□□□□ -0.09
USP48-210ENST00000489108 CLDN20P56880 219 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 FASTKD3Q14CZ7 662 aaKnown RBP14.52□□□□□ -0.09
USP48-210ENST00000489108 MORF4L2Q15014 288 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 TRMT12Q53H54 448 aaKnown RBP14.52□□□□□ -0.09
USP48-210ENST00000489108 ALKBH2Q6NS38 261 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 ISCA2Q86U28 154 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 FBXO36Q8NEA4 188 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 OR4K17Q8NGC6 315 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 OR52R1Q8NGF1 315 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 STAG3L4Q8TBR4 150 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 UBTD2Q8WUN7 234 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 C19orf24Q9BVV8 132 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 DSN1Q9H410 356 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 CDC42EP3Q9UKI2 254 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 CES1P1Q9UKY3 287 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 GPR55Q9Y2T6 319 aaPredicted RBP14.52□□□□□ -0.09
USP48-210ENST00000489108 ZNF175Q9Y473 711 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 ANGPTL3Q9Y5C1 460 aa14.52□□□□□ -0.09
USP48-210ENST00000489108 YLPM1P49750 1951 aaKnown RBP14.51□□□□□ -0.09
USP48-210ENST00000489108 TSPAN2O60636 221 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 NME6O75414 186 aaPredicted RBP14.51□□□□□ -0.09
USP48-210ENST00000489108 AQP8O94778 261 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 KLK1P06870 262 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 HK1P19367 917 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 PIK3CGP48736 1102 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 ARL4CP56559 192 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 GPX6P59796 221 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 SRSF2Q01130 221 aaKnown RBP14.51□□□□□ -0.09
USP48-210ENST00000489108 DUSP2Q05923 314 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 DLG1Q12959 904 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 RAET1LQ5VY80 246 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 ADAM5Q6NVV9 412 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 OR5M1Q8NGP8 315 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 SMAP2Q8WU79 429 aaPredicted RBP14.51□□□□□ -0.09
USP48-210ENST00000489108 NEUROG1Q92886 237 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 SLC35A4Q96G79 324 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 ATOH8Q96SQ7 321 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 ACTR6Q9GZN1 396 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 DDX47Q9H0S4 455 aaKnown RBP14.51□□□□□ -0.09
USP48-210ENST00000489108 PRODH2Q9UF12 536 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 RNF11Q9Y3C5 154 aa14.51□□□□□ -0.09
USP48-210ENST00000489108 MAGED1Q9Y5V3 778 aaPredicted RBP14.51□□□□□ -0.09
USP48-210ENST00000489108 CXorf49A8MYA2 514 aaPredicted RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 H3BML4 177 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 FOXE1O00358 373 aaPredicted RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 ERAL1O75616 437 aaKnown RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 ATP1B1P05026 303 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 THBS1P07996 1170 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 FAPQ12884 760 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 PDIA2Q13087 525 aaKnown RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 SLMAPQ14BN4 828 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 CTU2Q2VPK5 515 aaKnown RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 C6orf52Q5T4I8 152 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 GBP7Q8N8V2 638 aaPredicted RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 WDR20Q8TBZ3 569 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 FBXW5Q969U6 566 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 GPR22Q99680 433 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 LRRC1Q9BTT6 524 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 BEX2Q9BXY8 128 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 ANKRA2Q9H9E1 313 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 GDF2Q9UK05 429 aaPredicted RBP14.5□□□□□ -0.09
USP48-210ENST00000489108 CLEC4AQ9UMR7 237 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 PCDHA9Q9Y5H5 950 aa14.5□□□□□ -0.09
USP48-210ENST00000489108 ANK2Q01484 3957 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 UQCRHLA0A096LP55 91 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms