RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 OR6C70A6NIJ9 312 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 ESPNB1AK53 854 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 LSM1O15116 133 aaKnown RBP22.83■■□□□ 1.25
HMGN1-217ENST00000489072 TSPAN2O60636 221 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 WDR1O75083 606 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 REM1O75628 298 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 TRAPPC6AO75865 159 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 CHEK2O96017 543 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 HPNP05981 417 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 GLI4P10075 376 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 SDC1P18827 310 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 PTPN6P29350 595 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 NTSP30990 170 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 ETV4P43268 484 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 RPL38P63173 70 aaKnown RBP22.83■■□□□ 1.25
HMGN1-217ENST00000489072 KRT71Q3SY84 523 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 RFTN2Q52LD8 501 aaPredicted RBP22.83■■□□□ 1.25
HMGN1-217ENST00000489072 ANKRD26P1Q6NSI1 321 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 SLC30A6Q6NXT4 461 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 ANGPTL8Q6UXH0 198 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 B3GNT6Q6ZMB0 384 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 ACAD11Q709F0 780 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 CLYBLQ8N0X4 340 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 LIX1Q8N485 282 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 ASB5Q8WWX0 329 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 SLC35A4Q96G79 324 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 CCT7Q99832 543 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 TAS2R9Q9NYW1 312 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 RAB21Q9UL25 225 aa22.83■■□□□ 1.25
HMGN1-217ENST00000489072 C19orf53Q9UNZ5 99 aaPredicted RBP22.83■■□□□ 1.25
HMGN1-217ENST00000489072 CSMD1Q96PZ7 3565 aa22.83■■□□□ 1.24
HMGN1-217ENST00000489072 PRAMEF25A6NGN4 478 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 PLOD2O00469 737 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 PIP5K1BO14986 540 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 BPGMP07738 259 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 COX6B1P14854 86 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 CHRNB4P30926 498 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 ZNF155Q12901 538 aaPredicted RBP22.82■■□□□ 1.24
HMGN1-217ENST00000489072 SNTA1Q13424 505 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 SH2D4BQ5SQS7 431 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 C1orf185Q5T7R7 199 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 SLC44A2Q8IWA5 706 aaPredicted RBP22.82■■□□□ 1.24
HMGN1-217ENST00000489072 DDIASQ8IXT1 998 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 OR4N2Q8NGD1 307 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 OR1J4Q8NGS1 313 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 OR6Y1Q8NGX8 325 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 LILRB4Q8NHJ6 448 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 AGR3Q8TD06 166 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 ADOQ96SZ5 270 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 EML4Q9HC35 981 aaKnown RBP22.82■■□□□ 1.24
HMGN1-217ENST00000489072 ALKBH4Q9NXW9 302 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 KLRF1Q9NZS2 232 aa22.82■■□□□ 1.24
HMGN1-217ENST00000489072 C15orf38-AP3S2A0A0A6YYH1 394 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 UPK1AO00322 258 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 SNPHO15079 494 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 AKAP10O43572 662 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 COQ9O75208 318 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 SLITRK5O94991 958 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 PSMG1O95456 288 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 ELAVL4P26378 380 aaKnown RBP22.81■■□□□ 1.24
HMGN1-217ENST00000489072 PSG6Q00889 435 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 CRYZQ08257 329 aaKnown RBP22.81■■□□□ 1.24
HMGN1-217ENST00000489072 GALNTL6Q49A17 601 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 EIPR1Q53HC9 387 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 ZNF385BQ569K4 471 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 OR2L13Q8N349 312 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 CLHC1Q8NHS4 586 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 ELP4Q96EB1 424 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 TSSK3Q96PN8 268 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 UCK2Q9BZX2 261 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 GIMAP2Q9UG22 337 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 BAIAP2L1Q9UHR4 511 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 SLC6A5Q9Y345 797 aa22.81■■□□□ 1.24
HMGN1-217ENST00000489072 NKX2-6A6NCS4 301 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 FAM90A27PA6NNH2 459 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 ADH7P40394 386 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 CES4AQ5XG92 561 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 LARP4Q71RC2 724 aaKnown RBP eCLIP22.8■■□□□ 1.241e-8■■■■■ 31.7
HMGN1-217ENST00000489072 ZNF551Q7Z340 670 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-217ENST00000489072 ULK2Q8IYT8 1036 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 WDSUB1Q8N9V3 476 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 ACBD4Q8NC06 268 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 CIDECQ96AQ7 238 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-217ENST00000489072 TMCO6Q96DC7 493 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 ZNF764Q96H86 408 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-217ENST00000489072 MAPRE3Q9UPY8 281 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 TMED5Q9Y3A6 229 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 PCDHGB3Q9Y5G1 929 aa22.8■■□□□ 1.24
HMGN1-217ENST00000489072 A0A0G2JNJ9 132 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 PDPK1O15530 556 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 ABCB7O75027 752 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 PTGER4P35408 488 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 SERPINB5P36952 375 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 TOMM20Q15388 145 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 XKR7Q5GH72 579 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 WIPI1Q5MNZ9 446 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-217ENST00000489072 WDR53Q7Z5U6 358 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-217ENST00000489072 FAM83FQ8NEG4 500 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-217ENST00000489072 OR10Q1Q8NGQ4 319 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 RNF138Q8WVD3 245 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms