RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 NOL11Q9H8H0 719 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ANKHQ9HCJ1 492 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF304Q9HCX3 659 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 DHCR7Q9UBM7 475 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PCTPQ9UKL6 214 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 VPS4AQ9UN37 437 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PLLPQ9Y342 182 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 SNRNP200O75643 2136 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 H0YIG0 161 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 H3BMH7 237 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 E2F3O00716 465 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 TYROBPO43914 113 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FZD7O75084 574 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 CRCPO75575 148 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 DDAH2O95865 285 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 CHRM2P08172 466 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SERPINA6P08185 405 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 RAB40ALP0C0E4 278 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 NEFHP12036 1026 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 WT1P19544 449 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 ITGAXP20702 1163 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FBLP22087 321 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 RORAP35398 523 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FOLR3P41439 243 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 UQCRFS1P47985 274 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 CDH13P55290 713 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 DNAJB13P59910 316 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 KLRB1Q12918 225 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 IFT88Q13099 833 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 HERC3Q15034 1050 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF678Q5SXM1 525 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 C10orf62Q5T681 223 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 LIPMQ5VYY2 423 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 Q6ZNX1 250 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 VN1R4Q7Z5H5 301 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 KCTD20Q7Z5Y7 419 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FAM109AQ8N4B1 249 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 CCNYL1Q8N7R7 359 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SLC38A9Q8NBW4 561 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF740Q8NDX6 193 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SRFBP1Q8NEF9 429 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZCCHC10Q8TBK6 192 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 DNAJB14Q8TBM8 379 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 NT5CQ8TCD5 201 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 TCP10LQ8TDR4 215 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 TRPC4APQ8TEL6 797 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 CT55Q8WUE5 264 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 NEU4Q8WWR8 484 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FKBP10Q96AY3 582 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 TM4SF19Q96DZ7 209 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 L3HYPDHQ96EM0 354 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 MMABQ96EY8 250 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FAR2Q96K12 515 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 GBP5Q96PP8 586 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF317Q96PQ6 595 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FAM111AQ96PZ2 611 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 TMEM237Q96Q45 408 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 PAIP2Q9BPZ3 127 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 NTMT1Q9BV86 223 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SPNS1Q9H2V7 528 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 RHBGQ9H310 441 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SEMA4BQ9NPR2 832 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 COPG2Q9UBF2 871 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 NXT1Q9UKK6 140 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 EMCNQ9ULC0 261 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 FARSAQ9Y285 508 aaKnown RBP7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SLC22A7Q9Y694 548 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 HEATR5BQ9P2D3 2071 aa7.54□□□□□ -1.2
TRAPPC12-221ENST00000489032 SDK2Q58EX2 2172 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 SETD2Q9BYW2 2564 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 A0A0A6YYC8 382 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 LOC101059948A0A1B0GTJ6 334 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 TCP11X1B4DZS4 312 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 G3V2L1 256 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 H0YIV9 168 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 I3L1I5 382 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 P2RX6O15547 441 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 PROM1O43490 865 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 COQ9O75208 318 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 KRT6AP02538 564 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 STATHP02808 62 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 KRT6BP04259 564 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 LIFP15018 202 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 CREB1P16220 341 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 ALOX12P18054 663 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 EPORP19235 508 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 DRD4P21917 467 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 GNLYP22749 145 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 PTPN4P29074 926 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 HMOX2P30519 316 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 OR1D4P47884 311 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 KRT6CP48668 564 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 MLLT10P55197 1068 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 PKNOX1P55347 436 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 HNRNPH2P55795 449 aaKnown RBP7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 LCP2Q13094 533 aa7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 DDX39BQ13838 428 aaKnown RBP7.53□□□□□ -1.2
TRAPPC12-221ENST00000489032 NCF4Q15080 339 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms