RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 KIRREL3Q8IZU9 778 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 CLHC1Q8NHS4 586 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 TMBIM1Q969X1 311 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 ZBED6CLQ96FA7 236 aaPredicted RBP20.5■□□□□ 0.87
VAMP2-204ENST00000488857 COL21A1Q96P44 957 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 C20orf27Q9GZN8 174 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 UBQLN3Q9H347 655 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 TP63Q9H3D4 680 aaPredicted RBP20.5■□□□□ 0.87
VAMP2-204ENST00000488857 ACSS1Q9NUB1 689 aaPredicted RBP20.5■□□□□ 0.87
VAMP2-204ENST00000488857 DDX18Q9NVP1 670 aaKnown RBP20.5■□□□□ 0.87
VAMP2-204ENST00000488857 GIMAP2Q9UG22 337 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 ATP6V1HQ9UI12 483 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 RAP2CQ9Y3L5 183 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 HRH3Q9Y5N1 445 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 FREM3P0C091 2139 aa20.5■□□□□ 0.87
VAMP2-204ENST00000488857 TSPAN2O60636 221 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 NME6O75414 186 aaPredicted RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 DDX5P17844 614 aaKnown RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ELAVL4P26378 380 aaKnown RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 SMSP52788 366 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 PSG6Q00889 435 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 SMU1Q2TAY7 513 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ANKRD26P1Q6NSI1 321 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ZNF551Q7Z340 670 aaPredicted RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ZNF781Q8N8C0 355 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ZFP28Q8NHY6 868 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 RNF138Q8WVD3 245 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 CIDECQ96AQ7 238 aaPredicted RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ZBTB9Q96C00 473 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 JSRP1Q96MG2 331 aaPredicted RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 NODALQ96S42 347 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 SORT1Q99523 831 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 METTL7AQ9H8H3 244 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 ZNF395Q9H8N7 513 aaPredicted RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 NTMQ9P121 344 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 C15orf41Q9Y2V0 281 aa20.49■□□□□ 0.87
VAMP2-204ENST00000488857 KLF2Q9Y5W3 355 aaPredicted RBP20.49■□□□□ 0.87
VAMP2-204ENST00000488857 PHF3Q92576 2039 aaKnown RBP20.48■□□□□ 0.87
VAMP2-204ENST00000488857 TRGV5A0A0B4J1U4 118 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 SCAMP2O15127 329 aaKnown RBP20.48■□□□□ 0.87
VAMP2-204ENST00000488857 PRPS2P11908 318 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 BGNP21810 368 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 HPCAL1P37235 193 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 RPL3P39023 403 aaKnown RBP20.48■□□□□ 0.87
VAMP2-204ENST00000488857 PTGDSP41222 190 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 SLC1A6P48664 564 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 MAN2A2P49641 1150 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 ZNF155Q12901 538 aaPredicted RBP20.48■□□□□ 0.87
VAMP2-204ENST00000488857 CYP27C1Q4G0S4 372 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 TIGD3Q6B0B8 471 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 HIST2H2BCQ6DN03 193 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 DESI1Q6ICB0 168 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 C3P1Q6ZMU1 363 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 SLC44A2Q8IWA5 706 aaPredicted RBP20.48■□□□□ 0.87
VAMP2-204ENST00000488857 LIX1Q8N485 282 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 TLCD1Q96CP7 247 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 TUBGCP3Q96CW5 907 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 TMCO6Q96DC7 493 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 OSBPL11Q9BXB4 747 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 ASIC5Q9NY37 505 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 SH3BP4Q9P0V3 963 aa20.48■□□□□ 0.87
VAMP2-204ENST00000488857 TMEM120BA0PK00 339 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 TTC36A6NLP5 189 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 NPIPA2E9PIF3 369 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 NPIPA3F8WFD2 350 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 ICOSLGO75144 302 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 REM1O75628 298 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 HPNP05981 417 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 ENDOUP21128 410 aaKnown RBP20.47■□□□□ 0.87
VAMP2-204ENST00000488857 GDF1P27539 372 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 MASP1P48740 699 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 RPL14P50914 215 aaKnown RBP20.47■□□□□ 0.87
VAMP2-204ENST00000488857 PNLIPRP2P54317 469 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 HSPB3Q12988 150 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 MAD2L1Q13257 205 aaPredicted RBP20.47■□□□□ 0.87
VAMP2-204ENST00000488857 EFR3AQ14156 821 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 PTGR1Q14914 329 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 MLC1Q15049 377 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 GXYLT1Q4G148 440 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 FNDC5Q8NAU1 212 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 NEIL3Q8TAT5 605 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 HOXB13Q92826 284 aaPredicted RBP20.47■□□□□ 0.87
VAMP2-204ENST00000488857 SARAFQ96BY9 339 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 LMF2Q9BU23 707 aaKnown RBP20.47■□□□□ 0.87
VAMP2-204ENST00000488857 LDAHQ9H6V9 325 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 TMBIM4Q9HC24 238 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 PCDHGB3Q9Y5G1 929 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 ITPR2Q14571 2701 aa20.47■□□□□ 0.87
VAMP2-204ENST00000488857 CACNA1CQ13936 2221 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 PRAMEF25A6NGN4 478 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 SNPHO15079 494 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 PTPN6P29350 595 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 KRT20P35900 424 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 CDK9P50750 372 aaKnown RBP20.46■□□□□ 0.87
VAMP2-204ENST00000488857 MANFP55145 182 aaKnown RBP20.46■□□□□ 0.87
VAMP2-204ENST00000488857 WDR4P57081 412 aaKnown RBP20.46■□□□□ 0.87
VAMP2-204ENST00000488857 C21orf58P58505 322 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 MRPS22P82650 360 aaKnown RBP20.46■□□□□ 0.87
VAMP2-204ENST00000488857 EMX2Q04743 252 aa20.46■□□□□ 0.87
VAMP2-204ENST00000488857 STX3Q13277 289 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms