RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 UBQLN3Q9H347 655 aa14.6□□□□□ -0.07
CTDSP1-209ENST00000488627 ACKR4Q9NPB9 350 aa14.6□□□□□ -0.07
CTDSP1-209ENST00000488627 ACSS1Q9NUB1 689 aaPredicted RBP14.6□□□□□ -0.07
CTDSP1-209ENST00000488627 QPCTLQ9NXS2 382 aa14.6□□□□□ -0.07
CTDSP1-209ENST00000488627 OR14I1A6ND48 311 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 E9PLN8 166 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 AQP7O14520 342 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 SCAMP2O15127 329 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 HCN1O60741 890 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 ICOSLGO75144 302 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 REM1O75628 298 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 TPOP07202 933 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 LAMP1P11279 417 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 PRPS2P11908 318 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 COL8A1P27658 744 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 MAPK1P28482 360 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 MAP3K8P41279 467 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 CDK9P50750 372 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 RPP38P78345 283 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 EMX2Q04743 252 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 HSPB3Q12988 150 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 SNTA1Q13424 505 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 GAB1Q13480 694 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 PDCD2Q16342 344 aaPredicted RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 SMU1Q2TAY7 513 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 GXYLT1Q4G148 440 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 HHATQ5VTY9 493 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 TMEM198Q66K66 360 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 MTFR2Q6P444 385 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 R3HCC1LQ7Z5L2 792 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 WDR53Q7Z5U6 358 aaPredicted RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 CD163Q86VB7 1156 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 PACS2Q86VP3 889 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 KRTCAP2Q8N6L1 136 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 OR7A2PQ8NGA2 310 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 ARL8AQ96BM9 186 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 COQ8BQ96D53 544 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 ZBED6CLQ96FA7 236 aaPredicted RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 TMEM41AQ96HV5 264 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 ZNF597Q96LX8 424 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 JSRP1Q96MG2 331 aaPredicted RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 COL21A1Q96P44 957 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 GNRHR2Q96P88 292 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 ADOQ96SZ5 270 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 PAIP2Q9BPZ3 127 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 VKORC1Q9BQB6 163 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 LMF2Q9BU23 707 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 AKTIPQ9H8T0 292 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 DDX18Q9NVP1 670 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 PNPOQ9NVS9 261 aa14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 SUCOQ9UBS9 1254 aaKnown RBP14.59□□□□□ -0.07
CTDSP1-209ENST00000488627 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 NPIPA2E9PIF3 369 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 NPIPA3F8WFD2 350 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 ABCB7O75027 752 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 SNNO75324 88 aaPredicted RBP14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 G6PDP11413 515 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 ESRRAP11474 423 aaPredicted RBP14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 EFNA1P20827 205 aaPredicted RBP14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 MANFP55145 182 aaKnown RBP14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 C21orf58P58505 322 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 PSPHP78330 225 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 MLC1Q15049 377 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 CYP27C1Q4G0S4 372 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 TIGD3Q6B0B8 471 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 SLC30A6Q6NXT4 461 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 RPTNQ6XPR3 784 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 MRGPRGQ86SM5 289 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 MARVELD2Q8N4S9 558 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 WDSUB1Q8N9V3 476 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 PHF10Q8WUB8 498 aaKnown RBP14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 PPP1R36Q96LQ0 422 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 METTL7AQ9H8H3 244 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 GALNT9Q9HCQ5 603 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 SIRT3Q9NTG7 399 aaPredicted RBP14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 ASIC5Q9NY37 505 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 SPRR3Q9UBC9 169 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 TNFRSF10DQ9UBN6 386 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 C15orf41Q9Y2V0 281 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 CROCCQ5TZA2 2017 aa14.58□□□□□ -0.08
CTDSP1-209ENST00000488627 ZNF407Q9C0G0 2248 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 TRGV5A0A0B4J1U4 118 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 C2orf72A6NCS6 295 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 SNPHO15079 494 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 PRPS1L1P21108 318 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 PTPN6P29350 595 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 MAN2A2P49641 1150 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 PNLIPRP2P54317 469 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 DIO3P55073 304 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 CLDN8P56748 225 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 ZNF155Q12901 538 aaPredicted RBP14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 CDSNQ15517 529 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 EXOSC6Q5RKV6 272 aaKnown RBP14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 AGBL2Q5U5Z8 902 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 LARP4Q71RC2 724 aaKnown RBP eCLIP14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 RPRMLQ8N4K4 120 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 ZNF808Q8N4W9 903 aaPredicted RBP14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 ZFP28Q8NHY6 868 aa14.57□□□□□ -0.08
CTDSP1-209ENST00000488627 NEIL3Q8TAT5 605 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms