RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 GID8Q9NWU2 228 aa9.53□□□□□ -0.88
SKA1-204ENST00000488454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
SKA1-204ENST00000488454 MRTO4Q9UKD2 239 aaKnown RBP9.53□□□□□ -0.88
SKA1-204ENST00000488454 ZNF451Q9Y4E5 1061 aa9.53□□□□□ -0.88
SKA1-204ENST00000488454 PCDHGB7Q9Y5F8 929 aa9.53□□□□□ -0.88
SKA1-204ENST00000488454 PCDHGB3Q9Y5G1 929 aa9.53□□□□□ -0.88
SKA1-204ENST00000488454 PCDHGA9Q9Y5G4 932 aaKnown RBP9.53□□□□□ -0.88
SKA1-204ENST00000488454 DMXL2Q8TDJ6 3036 aa9.53□□□□□ -0.88
SKA1-204ENST00000488454 CACNA1GO43497 2377 aa9.52□□□□□ -0.88
SKA1-204ENST00000488454 FRG2CA6NGY1 282 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 DUXAA6NLW8 204 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 EVPLLA8MZ36 301 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 MRASO14807 208 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 OR2J2O76002 312 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 AGR2O95994 175 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 NPPAP01160 153 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 COX4I1P13073 169 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 CD1EP15812 388 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 PPIBP23284 216 aaKnown RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 PRDX6P30041 224 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 SOX18P35713 384 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 CDKN2CP42773 168 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ARG2P78540 354 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 DUSP8Q13202 625 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 KCNAB2Q13303 367 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 MFAP5Q13361 173 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ART3Q13508 389 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 COQ5Q5HYK3 327 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 PAGE3Q5JUK9 113 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 TBCELQ5QJ74 424 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 OPN5Q6U736 354 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 DNAJC14Q6Y2X3 702 aaPredicted RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 CLEC4FQ8N1N0 589 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ZADH2Q8N4Q0 377 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ADAMTS15Q8TE58 950 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ADIPOR1Q96A54 375 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 NEURL3Q96EH8 262 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 HSPBAP1Q96EW2 488 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 C16orf58Q96GQ5 468 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 SLC35G5Q96KT7 338 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 VSTM2LQ96N03 204 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 SMAD5Q99717 465 aaKnown RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 NPAS2Q99743 824 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 UTP23Q9BRU9 249 aaKnown RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 YIPF4Q9BSR8 244 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 LMF2Q9BU23 707 aaKnown RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 PAIP1Q9H074 479 aaKnown RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 ADNPQ9H2P0 1102 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 RAD21L1Q9H4I0 556 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 EFCAB1Q9HAE3 211 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 IL1RL2Q9HB29 575 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 Q9N2J8 555 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 SLC52A3Q9NQ40 469 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 SERHLQ9NQF3 203 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 BAHCC1Q9P281 2608 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 TUBD1Q9UJT1 453 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ERVK-11Q9UQG0 969 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 GPR55Q9Y2T6 319 aaPredicted RBP9.52□□□□□ -0.89
SKA1-204ENST00000488454 PCDHB14Q9Y5E9 798 aa9.52□□□□□ -0.89
SKA1-204ENST00000488454 ACACBO00763 2458 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CROCCQ5TZA2 2017 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 ASPDHA6ND91 283 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 TMEM200CA6NKL6 621 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 A8MVJ9 347 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CLIC1O00299 241 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 AIM2O14862 343 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 PSMG1O95456 288 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 FAM87AP0C7U9 286 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CT45A8P0DMV1 189 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CT45A9P0DMV2 189 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 MAGEA8P43361 318 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CYB561P49447 251 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 TMED10P49755 219 aaKnown RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 MNAT1P51948 309 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 PSMD4P55036 377 aaKnown RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 TXNL4AP83876 142 aaKnown RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 GAB1Q13480 694 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 NNATQ16517 81 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 LINC00303Q3SY05 128 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CYP27C1Q4G0S4 372 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CT45A2Q5DJT8 189 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 LRIF1Q5T3J3 769 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 ATAD3BQ5T9A4 648 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 SAXO2Q658L1 398 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 REP15Q6BDI9 236 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 MFSD12Q6NUT3 480 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 CDC73Q6P1J9 531 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 IL20RBQ6UXL0 311 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 C16orf47Q6ZP98 133 aaPredicted RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 WDR53Q7Z5U6 358 aaPredicted RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 DHDDSQ86SQ9 333 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 HPS6Q86YV9 775 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 TREML1Q86YW5 311 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 GPALPP1Q8IXQ4 340 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 DND1Q8IYX4 353 aaKnown RBP9.51□□□□□ -0.89
SKA1-204ENST00000488454 BEST3Q8N1M1 668 aa9.51□□□□□ -0.89
SKA1-204ENST00000488454 ARMC10Q8N2F6 343 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms