RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ASPHQ12797 758 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 FAPQ12884 760 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 E2F2Q14209 437 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 PCBP2Q15366 365 aaKnown RBP eCLIP5.45□□□□□ -1.542e-8■■■■□ 23
CDHR3-213ENST00000488386 ELAVL1Q15717 326 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CDKL4Q5MAI5 379 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 DEPDC1Q5TB30 811 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SP5Q6BEB4 398 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 NIPAL1Q6NVV3 410 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 KLC3Q6P597 504 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SCIMPQ6UWF3 145 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM64Q6YI46 380 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 MRGPRGQ86SM5 289 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 C9orf40Q8IXQ3 194 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SRRM1Q8IYB3 904 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF595Q8IYB9 648 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF808Q8N4W9 903 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 OR4F6Q8NGB9 312 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 RHEBL1Q8TAI7 183 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 WDR20Q8TBZ3 569 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF721Q8TF20 911 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM125Q96AQ2 219 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CMTM7Q96FZ5 175 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 MAGED4Q96JG8 741 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 GAL3ST4Q96RP7 486 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 RASL10BQ96S79 203 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CCDC77Q9BR77 488 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TBCDQ9BTW9 1192 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ERVK-6Q9BXR3 956 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 MRPL1Q9BYD6 325 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ENKD1Q9H0I2 346 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 LYRM4Q9HD34 91 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 HPF1Q9NWY4 346 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TEX10Q9NXF1 929 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM216Q9P0N5 145 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TBK1Q9UHD2 729 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 PCTPQ9UKL6 214 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ERVK-19Q9WJR5 959 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 MRPS33Q9Y291 106 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CLCA3PQ9Y6N3 262 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 GTF3C1Q12789 2109 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SPTAN1Q13813 2472 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SPTBN1Q01082 2364 aaKnown RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 A0A087WUV0 522 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 A0A0A6YYD5 115 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 EXOC1LA0A1B0GW35 172 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 A0A1W2PPM1 405 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 SMIM23A6NLE4 172 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 A8MT66 165 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PGRMC2O15173 223 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 OR4F21O95013 312 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 SCELO95171 688 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CLDN9O95484 217 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 NADKO95544 446 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PDYNP01213 254 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CLPSP04118 112 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 KLK1P06870 262 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 TPOP07202 933 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 RPS17P08708 135 aaKnown RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 FAM58BPP0C7Q3 252 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CCL3P10147 92 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CHN1P15882 459 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF20P17024 532 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CTSSP25774 331 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 GSTM2P28161 218 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 STT3AP46977 705 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 SELENOPP49908 381 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 HTR6P50406 440 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CCNG1P51959 295 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PER3P56645 1201 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PLGLB1Q02325 96 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 DUSP2Q05923 314 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 RBPJQ06330 500 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 TRAF3Q13114 568 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF267Q14586 743 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 ADRM1Q16186 407 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 NNATQ16517 81 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 SPATS1Q496A3 300 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM35AQ53FP2 167 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CMPK2Q5EBM0 449 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PRAMEF20Q5VT98 475 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 LIPJQ5W064 366 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 TTC19Q6DKK2 380 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 CYP20A1Q6UW02 462 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 HSDL2Q6YN16 418 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 GPR180Q86V85 440 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PRR22Q8IZ63 422 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM132CQ8N3T6 1108 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 MARVELD2Q8N4S9 558 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 HORMAD2Q8N7B1 307 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 FAM98AQ8NCA5 519 aaKnown RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 PSD4Q8NDX1 1056 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 SIMC1Q8NDZ2 872 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 C1orf162Q8NEQ5 155 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-213ENST00000488386 OR5M3Q8NGP4 307 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 OR14A16Q8NHC5 309 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 ADAMTS18Q8TE60 1221 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 TRPC4APQ8TEL6 797 aa5.44□□□□□ -1.54
CDHR3-213ENST00000488386 AGAP11Q8TF27 550 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms