RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SLC34A3Q8N130 599 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 PSD4Q8NDX1 1056 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 PIK3R3Q92569 461 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 SLC9A6Q92581 669 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 TMBIM1Q969X1 311 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 TP53INP1Q96A56 240 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 EFHD2Q96C19 240 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 OMA1Q96E52 524 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 SPDL1Q96EA4 605 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 SCMH1Q96GD3 660 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 SLC35G5Q96KT7 338 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 PANX1Q96RD7 426 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 LMF2Q9BU23 707 aaKnown RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 EPN3Q9H201 632 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 TRIM45Q9H8W5 580 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 GPATCH2Q9NW75 528 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 NTMQ9P121 344 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 BTNL2Q9UIR0 455 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 NTNG1Q9Y2I2 539 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 OR10H1Q9Y4A9 318 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 NPFFR2Q9Y5X5 522 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 ZNF407Q9C0G0 2248 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 GMNCA6NCL1 334 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CCDC154A6NI56 674 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 ACOX3O15254 700 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 PPM1BO75688 479 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CD46P15529 392 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 DRD5P21918 477 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CHI3L1P36222 383 aaPredicted RBP10.17□□□□□ -0.78
UBE4B-210ENST00000488228 GPR85P60893 370 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 NTRK2Q16620 822 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 DUSP5Q16690 384 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 VPS26BQ4G0F5 336 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 EXOSC6Q5RKV6 272 aaKnown RBP10.17□□□□□ -0.78
UBE4B-210ENST00000488228 PRAMEF20Q5VT98 475 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 BICRALQ6AI39 1079 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 ANGPTL8Q6UXH0 198 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 MSANTD1Q6ZTZ1 278 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 GALNTL5Q7Z4T8 443 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CPLX4Q7Z7G2 160 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 GPALPP1Q8IXQ4 340 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 SLC15A4Q8N697 577 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CDRT4Q8N9R6 151 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 SLC16A11Q8NCK7 471 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 VPS37AQ8NEZ2 397 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 OR5D16Q8NGK9 328 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 PNPT1Q8TCS8 783 aaKnown RBP10.17□□□□□ -0.78
UBE4B-210ENST00000488228 GPR151Q8TDV0 419 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 HOXB13Q92826 284 aaPredicted RBP10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CDS1Q92903 461 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 TMEM125Q96AQ2 219 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 MOAP1Q96BY2 351 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 HSPBAP1Q96EW2 488 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 RMND5BQ96G75 393 aaPredicted RBP10.17□□□□□ -0.78
UBE4B-210ENST00000488228 SLC35A5Q9BS91 424 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 NMUR2Q9GZQ4 415 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 Q9N2J8 555 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 TIMMDC1Q9NPL8 285 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 SAR1AQ9NR31 198 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 DEPPQ9NTK1 212 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 ARMCX1Q9P291 453 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 MAP10Q9P2G4 905 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 ANAPC2Q9UJX6 822 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 VPS4AQ9UN37 437 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 PCDHGB4Q9UN71 923 aa10.17□□□□□ -0.78
UBE4B-210ENST00000488228 CHCHD2Q9Y6H1 151 aaPredicted RBP10.17□□□□□ -0.78
UBE4B-210ENST00000488228 ZGRF1Q86YA3 2104 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 MYO18BQ8IUG5 2567 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 PINLYPA6NC86 204 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 RFXANKO14593 260 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 TO15178 435 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 SNX3O60493 162 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 UGT2B11O75310 529 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 NKX2-2O95096 273 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 SP1P08047 785 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 ALOX5P09917 674 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 UQCRC2P22695 453 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 PTPN6P29350 595 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 IL12BP29460 328 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 GABRA3P34903 492 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 PIGAP37287 484 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 RFC3P40938 356 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 MAP3K8P41279 467 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 PRIM2P49643 509 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 TMED10P49755 219 aaKnown RBP10.16□□□□□ -0.78
UBE4B-210ENST00000488228 MLLT10P55197 1068 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 METTL21CQ5VZV1 264 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 SAXO2Q658L1 398 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 SLC25A25Q6KCM7 469 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 TNFAIP8L2Q6P589 184 aaPredicted RBP10.16□□□□□ -0.78
UBE4B-210ENST00000488228 FBXW8Q8N3Y1 598 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 CPSF7Q8N684 471 aaKnown RBP10.16□□□□□ -0.78
UBE4B-210ENST00000488228 HORMAD2Q8N7B1 307 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 BCORP1Q8N888 145 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 COX18Q8N8Q8 333 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 GOLM1Q8NBJ4 401 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 TMEM178AQ8NBL3 297 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 GOT1L1Q8NHS2 421 aaPredicted RBP10.16□□□□□ -0.78
UBE4B-210ENST00000488228 HGDQ93099 445 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 AURKBQ96GD4 344 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms