RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ABCC1P33527 1531 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 PIK3C2AO00443 1686 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 TET3O43151 1660 aa3.27□□□□□ -1.89
ECHDC1-217ENST00000488087 ABCA8O94911 1581 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ADAMTS12P58397 1594 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ERCC6L2Q5T890 1561 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ARAP3Q8WWN8 1544 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 A0A087WWV3 80 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 IQANK1A0A1B0GTG1 560 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 LOC105371267A0A1B0GV96 52 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MEX3AA1L020 520 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 SMIM30A4D0T7 59 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 BTNL10A8MVZ5 291 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 M0R296 226 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 NTN3O00634 580 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 NME6O75414 186 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 DCTN3O75935 186 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 OXSR1O95747 527 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MT-ND2P03891 347 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 GOT1P17174 413 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 CTNNA2P26232 953 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MAPK3P27361 379 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 PTPN4P29074 926 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MARCKSP29966 332 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 GNA11P29992 359 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 HMOX2P30519 316 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 CA8P35219 290 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 KRT6CP48668 564 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 TMED10P49755 219 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 HNRNPFP52597 415 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC18A1P54219 525 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGOHP61326 146 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 DR1Q01658 176 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 DNAJC3Q13217 504 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 DPYSQ14117 519 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 GRB14Q14449 540 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 STXBP2Q15833 593 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ANKDD1AQ495B1 522 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 C2CD6Q53TS8 623 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 DOK6Q6PKX4 331 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 LCLAT1Q6UWP7 414 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC74BQ6ZQY2 392 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 C1orf186Q6ZWK4 172 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 C5orf24Q7Z6I8 188 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 VPS36Q86VN1 386 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ERI1Q8IV48 349 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 TBC1D21Q8IYX1 336 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 METTL4Q8N3J2 472 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ATP6V0D2Q8N8Y2 350 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 AQP11Q8NBQ7 271 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MINDY2Q8NBR6 621 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 RNF149Q8NC42 400 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 OR7G1Q8NGA0 311 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 RPLP0P6Q8NHW5 317 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ACTRT1Q8TDG2 376 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 DDI1Q8WTU0 396 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 CDKL2Q92772 493 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGOHBQ96A72 148 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MRPL38Q96DV4 380 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ATXN7L3BQ96GX2 97 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 EPSTI1Q96J88 318 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 RUNDC3BQ96NL0 473 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 VGLL1Q99990 258 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 CABLES2Q9BTV7 478 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 TEX13BQ9BXU2 312 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC38A10Q9HBR0 1119 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 NLGN3Q9NZ94 848 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 FAM153AQ9UHL3 310 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MAD2L2Q9UI95 211 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MOSPD1Q9UJG1 213 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 APPL1Q9UKG1 709 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ANGPTL2Q9UKU9 493 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 GUCA1BQ9UMX6 200 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 IFT52Q9Y366 437 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 WIPI2Q9Y4P8 454 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 PRSS21Q9Y6M0 314 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 XRN1Q8IZH2 1706 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 ARHGEF28Q8N1W1 1705 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MRC1P22897 1456 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MRC2Q9UBG0 1479 aa3.26□□□□□ -1.89
ECHDC1-217ENST00000488087 MROH7-TTC4A0A0A0MT08 1334 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TULP4Q9NRJ4 1543 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 A0A087X0K7 114 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 A0A1B0GU03 582 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 hCG_38984A0A1B0GV85 526 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 IQCMA0A1B0GVH7 501 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGEB16A2A368 324 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 FUOMA2VDF0 154 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ANTXRLA6NF34 631 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ANKDD1BA6NHY2 528 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 A8MUI8 341 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 GOLGA8MH3BSY2 632 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 HAT1O14929 419 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 PFDN6O15212 129 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TXNL1O43396 289 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 PSMG1O95456 288 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 KRT6AP02538 564 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 APOEP02649 317 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 KRT6BP04259 564 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms