RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ALOX15BO15296 676 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 SMPD2O60906 423 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 APBB3O95704 486 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 NCF1P14598 390 aaPredicted RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 MDH1P40925 334 aaKnown RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 BRCC3P46736 316 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 HTR5AP47898 357 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 PGFP49763 221 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 OSTNP61366 133 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 CRMP1Q14194 572 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 CCL14Q16627 93 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 PCK2Q16822 640 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 ADPRMQ3LIE5 342 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 C14orf28Q4W4Y0 310 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 WASH2PQ6VEQ5 465 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 LPCAT2Q7L5N7 544 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 NET1Q7Z628 596 aaPredicted RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 SLC25A42Q86VD7 318 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 SLC47A2Q86VL8 602 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 ERICH1Q86X53 443 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 CCDC36Q8IYA8 594 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 FAM222BQ8WU58 562 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 SYAP1Q96A49 352 aaPredicted RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 TADA1Q96BN2 335 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 SLC25A36Q96CQ1 311 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 RAB3CQ96E17 227 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 ELMO2Q96JJ3 720 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 TRIM9Q9C026 710 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 TRIM6Q9C030 488 aaPredicted RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 COG4Q9H9E3 785 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 AMBNQ9NP70 447 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 DCAF13Q9NV06 445 aaKnown RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 C1orf123Q9NWV4 160 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 DUS2Q9NX74 493 aaKnown RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 RAI14Q9P0K7 980 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 KLF2Q9Y5W3 355 aaPredicted RBP3.65□□□□□ -1.83
SMC4-218ENST00000486711 ACOD1A6NK06 481 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 PDLIM1O00151 329 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 CHADO15335 359 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 LRRTM2O43300 516 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 GALR3O60755 368 aaPredicted RBP3.64□□□□□ -1.83
SMC4-218ENST00000486711 SDC3O75056 442 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 SH3BGRLO75368 114 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 ANP32DO95626 131 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 SEMA4FO95754 770 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 KRT6BP04259 564 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 THRBP10828 461 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 UQCRBP14927 111 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 KRT6CP48668 564 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 RPL34P49207 117 aaKnown RBP3.64□□□□□ -1.83
SMC4-218ENST00000486711 ARHGDIAP52565 204 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 HAND2P61296 217 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 ZP4Q12836 540 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 EXOSC2Q13868 293 aaKnown RBP3.64□□□□□ -1.83
SMC4-218ENST00000486711 RFTN1Q14699 578 aaPredicted RBP3.64□□□□□ -1.83
SMC4-218ENST00000486711 ZNF311Q5JNZ3 666 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 LINC00242Q5T6M2 205 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 RIPPLY2Q5TAB7 128 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 FAM219BQ5XKK7 198 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 PRR5LQ6MZQ0 368 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 LEG1Q6P5S2 330 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 RFWD3Q6PCD5 774 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 ZNF562Q6V9R5 426 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 TIPARPQ7Z3E1 657 aaKnown RBP3.64□□□□□ -1.83
SMC4-218ENST00000486711 P2RY8Q86VZ1 359 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 CENPLQ8N0S6 344 aaPredicted RBP3.64□□□□□ -1.83
SMC4-218ENST00000486711 GCNT2Q8N0V5 402 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 ZNF491Q8N8L2 437 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 CSNK1G2-AS1Q8NCQ2 148 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 C17orf47Q8NEP4 570 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 TOMM40LQ969M1 308 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 HPDLQ96IR7 371 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 VSTM2LQ96N03 204 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 VPS35Q96QK1 796 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 GPA33Q99795 319 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 SOSTQ9BQB4 213 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 TTYH2Q9BSA4 534 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 TBCDQ9BTW9 1192 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 ZNF416Q9BWM5 594 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 COQ10BQ9H8M1 238 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 LPAR2Q9HBW0 351 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 SLC35D1Q9NTN3 355 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMC4-218ENST00000486711 MBD2Q9UBB5 411 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 KLK13Q9UKR3 277 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 RNF24Q9Y225 148 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 STYXL1Q9Y6J8 313 aa3.64□□□□□ -1.83
SMC4-218ENST00000486711 CUX2O14529 1486 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 A0A0U1RQV5 110 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 RNF222A6NCQ9 220 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 TRIM49BA6NDI0 452 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 FBLL1A6NHQ2 334 aaKnown RBP3.63□□□□□ -1.83
SMC4-218ENST00000486711 WASHC1A8K0Z3 465 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ZNF487B1APH4 448 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 H0YL77 283 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 MAPK13O15264 365 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 TYROBPO43914 113 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 PEX11AO75192 247 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 IDH1O75874 414 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms