RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TMEM164Q5U3C3 297 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 CDC73Q6P1J9 531 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 TMEM154Q6P9G4 183 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 C19orf48Q6RUI8 117 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 ARHGAP22Q7Z5H3 698 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 TMEM179BQ7Z7N9 219 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 ZNF595Q8IYB9 648 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 ZNF675Q8TD23 568 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 ADAMTS15Q8TE58 950 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 PROX1Q92786 737 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 ANKRD9Q96BM1 317 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 C16orf58Q96GQ5 468 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 SLC41A2Q96JW4 573 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 EPYCQ99645 322 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 TREX2Q9BQ50 279 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 YIPF4Q9BSR8 244 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 UBAP1Q9NZ09 502 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 C19orf53Q9UNZ5 99 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 PCDHGB3Q9Y5G1 929 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 U3KQV3 271 aa13.63□□□□□ -0.23
POLR2J3-204ENST00000486319 CFAP47Q6ZTR5 3102 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 PRAMEF27A3QJZ7 478 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 EFCAB7A8K855 629 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 CLDN4O14493 209 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 PLOD3O60568 738 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 CTNSO60931 367 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 OR2B3O76000 313 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 DIRAS1O95057 198 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 MED26O95402 600 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 ITPKBP27987 946 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 ID2Q02363 134 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 PRICKLE4Q2TBC4 344 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 GPAT3Q53EU6 434 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 KRT80Q6KB66 452 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 MFSD12Q6NUT3 480 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 ZCCHC12Q6PEW1 402 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 FAM111BQ6SJ93 734 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 KCNE4Q8WWG9 221 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 MVB12AQ96EY5 273 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 MMABQ96EY8 250 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 COL21A1Q96P44 957 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 TAAR9Q96RI9 348 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 SPRTNQ9H040 489 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 ZNF768Q9H5H4 540 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 EQTNQ9NQ60 294 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 OCIAD1Q9NX40 245 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 VNN3Q9NY84 501 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 NDUFAF4Q9P032 175 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 HCN3Q9P1Z3 774 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 SEC14L3Q9UDX4 400 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 C3orf18Q9UK00 162 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 SH3GLB1Q9Y371 365 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 ORC6Q9Y5N6 252 aa13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 MAGED1Q9Y5V3 778 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-204ENST00000486319 ZFHX4Q86UP3 3567 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 TMEM150CB9EJG8 249 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 DNAJB5O75953 348 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 TNFAIP8O95379 198 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 SNAP29O95721 258 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 IFNW1P05000 195 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 FESP07332 822 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 NELFEP18615 380 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 CD247P20963 164 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 MYF6P23409 242 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 OR1E2P47887 323 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 KCNJ5P48544 419 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 RAD23AP54725 363 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 PPP1R8Q12972 351 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 SLC13A2Q13183 592 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 GK3PQ14409 553 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 KCNAB1Q14722 419 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 DUSP7Q16829 419 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 FHL5Q5TD97 284 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 YOD1Q5VVQ6 348 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 C16orf62Q7Z3J2 963 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 SPACA3Q8IXA5 215 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 GPR135Q8IZ08 494 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 CYGBQ8WWM9 190 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 PEX11GQ96HA9 241 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 ZNF354BQ96LW1 612 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 B3GNT4Q9C0J1 378 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 SMURF2Q9HAU4 748 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 PNPLA3Q9NST1 481 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 CUTCQ9NTM9 273 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 GIN1Q9NXP7 522 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 SLC39A1Q9NY26 324 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 MAT2BQ9NZL9 334 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 FAM32AQ9Y421 112 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 NUP210LQ5VU65 1888 aa13.61□□□□□ -0.23
POLR2J3-204ENST00000486319 B4E171 279 aa13.6□□□□□ -0.23
POLR2J3-204ENST00000486319 C9orf172C9J069 976 aa13.6□□□□□ -0.23
POLR2J3-204ENST00000486319 H3BMH7 237 aa13.6□□□□□ -0.23
POLR2J3-204ENST00000486319 KLK10O43240 276 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms